Gene : Cre04.g228700 C. reinhardtii v5.6
Genomic Order:  488 Name:  ? Cre04.g228700
Secondary Identifier:  ? PAC:30790959
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g228700 0.5kb upstream 0.5kb upstream 4462 true chromosome_4: 3640877-3645338 Chlamydomonas reinhardtii
Cre04.g228700 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 3640877-3641376 Chlamydomonas reinhardtii
Cre04.g228700 0.5kb downstream 0.5kb downstream 4462 true chromosome_4: 3641377-3645838 Chlamydomonas reinhardtii
Cre04.g228700 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 3645339-3645838 Chlamydomonas reinhardtii
Cre04.g228700 1.0kb upstream 1.0kb upstream 4962 true chromosome_4: 3640377-3645338 Chlamydomonas reinhardtii
Cre04.g228700 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 3640377-3641376 Chlamydomonas reinhardtii
Cre04.g228700 1.0kb downstream 1.0kb downstream 4962 true chromosome_4: 3641377-3646338 Chlamydomonas reinhardtii
Cre04.g228700 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 3645339-3646338 Chlamydomonas reinhardtii
Cre04.g228700 2.0kb upstream 2.0kb upstream 5962 true chromosome_4: 3639377-3645338 Chlamydomonas reinhardtii
Cre04.g228700 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 3639377-3641376 Chlamydomonas reinhardtii
Cre04.g228700 2.0kb downstream 2.0kb downstream 5962 true chromosome_4: 3641377-3647338 Chlamydomonas reinhardtii
Cre04.g228700 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 3645339-3647338 Chlamydomonas reinhardtii
Cre04.g228700 5.0kb upstream 5.0kb upstream 8962 true chromosome_4: 3636377-3645338 Chlamydomonas reinhardtii
Cre04.g228700 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 3636377-3641376 Chlamydomonas reinhardtii
Cre04.g228700 5.0kb downstream 5.0kb downstream 8962 true chromosome_4: 3641377-3650338 Chlamydomonas reinhardtii
Cre04.g228700 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 3645339-3650338 Chlamydomonas reinhardtii
Cre04.g228700 10.0kb upstream 10.0kb upstream 13962 true chromosome_4: 3631377-3645338 Chlamydomonas reinhardtii
Cre04.g228700 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 3631377-3641376 Chlamydomonas reinhardtii
Cre04.g228700 10.0kb downstream 10.0kb downstream 13962 true chromosome_4: 3641377-3655338 Chlamydomonas reinhardtii
Cre04.g228700 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 3645339-3655338 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080791 5260 Chlorophyte Singleton cluster - no MSA
123398559 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.532        
cufflinks 0.101     Low  
cufflinks 0.058     Low  
cufflinks 0.427        
cufflinks 0.157        
cufflinks 0.113     Low  
cufflinks 0.108     Low  
cufflinks 1.003       High
cufflinks 0.529        
cufflinks 0.01     Low Low
cufflinks 0.295        
cufflinks 0.49        
cufflinks 0.044     Low Low
cufflinks 0.028     Low Low
cufflinks 0.791        
cufflinks 0.242        
cufflinks 1.52       High
cufflinks 0.095     Low  
cufflinks 0.291        
cufflinks 0.02     Low Low
cufflinks 0.423        
cufflinks 2.399       High
cufflinks 0.031     Low Low
cufflinks 0.771        
cufflinks 2.747       High
cufflinks 0.104264 0.0 0.252372 Low High
cufflinks 0.343963 0.0 0.831643 Low  
cufflinks 0.195478 0.0 0.624165 Low  
cufflinks 0.972197 0.0 1.94668   High
cufflinks 0.456048 0.0 1.05582    

0 Strain