Gene : IPA1 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g215850 Defline:  (1 of 1) PF00514//PF01749//PF16186 - Armadillo/beta-catenin-like repeat (Arm) // Importin beta binding domain (IBB) // Atypical Arm repeat (Arm_3)
Genomic Order:  145 Name:  ? Cre04.g215850
Secondary Identifier:  ? PAC:30791448
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g215850 0.5kb upstream 0.5kb upstream 4891 true chromosome_4: 1149426-1154316 Chlamydomonas reinhardtii
Cre04.g215850 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1149426-1149925 Chlamydomonas reinhardtii
Cre04.g215850 0.5kb downstream 0.5kb downstream 4891 true chromosome_4: 1149926-1154816 Chlamydomonas reinhardtii
Cre04.g215850 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1154317-1154816 Chlamydomonas reinhardtii
Cre04.g215850 1.0kb upstream 1.0kb upstream 5391 true chromosome_4: 1148926-1154316 Chlamydomonas reinhardtii
Cre04.g215850 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1148926-1149925 Chlamydomonas reinhardtii
Cre04.g215850 1.0kb downstream 1.0kb downstream 5391 true chromosome_4: 1149926-1155316 Chlamydomonas reinhardtii
Cre04.g215850 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1154317-1155316 Chlamydomonas reinhardtii
Cre04.g215850 2.0kb upstream 2.0kb upstream 6391 true chromosome_4: 1147926-1154316 Chlamydomonas reinhardtii
Cre04.g215850 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1147926-1149925 Chlamydomonas reinhardtii
Cre04.g215850 2.0kb downstream 2.0kb downstream 6391 true chromosome_4: 1149926-1156316 Chlamydomonas reinhardtii
Cre04.g215850 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1154317-1156316 Chlamydomonas reinhardtii
Cre04.g215850 5.0kb upstream 5.0kb upstream 9391 true chromosome_4: 1144926-1154316 Chlamydomonas reinhardtii
Cre04.g215850 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1144926-1149925 Chlamydomonas reinhardtii
Cre04.g215850 5.0kb downstream 5.0kb downstream 9391 true chromosome_4: 1149926-1159316 Chlamydomonas reinhardtii
Cre04.g215850 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1154317-1159316 Chlamydomonas reinhardtii
Cre04.g215850 10.0kb upstream 10.0kb upstream 14391 true chromosome_4: 1139926-1154316 Chlamydomonas reinhardtii
Cre04.g215850 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1139926-1149925 Chlamydomonas reinhardtii
Cre04.g215850 10.0kb downstream 10.0kb downstream 14391 true chromosome_4: 1149926-1164316 Chlamydomonas reinhardtii
Cre04.g215850 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1154317-1164316 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108868 5260 Chlorophyte View MSA
123424377 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.904     High Low
cufflinks 44.537     High  
cufflinks 53.968     High High
cufflinks 42.606     High  
cufflinks 34.816     High  
cufflinks 40.586     High  
cufflinks 67.165     High High
cufflinks 52.372     High High
cufflinks 15.083     High Low
cufflinks 16.743     High  
cufflinks 40.613     High  
cufflinks 48.065     High  
cufflinks 24.803     High  
cufflinks 32.583     High  
cufflinks 32.226     High  
cufflinks 23.043     High  
cufflinks 10.922       Low
cufflinks 43.892     High  
cufflinks 9.204     High Low
cufflinks 32.968     High  
cufflinks 32.15     High  
cufflinks 9.978       Low
cufflinks 48.768     High  
cufflinks 45.527     High  
cufflinks 9.997       Low
cufflinks 86.0821 0.0 176.493 High Low
cufflinks 37.5981 8.16871 67.0275 High  
cufflinks 34.6955 0.0 71.6401 High  
cufflinks 48.0487 0.0 98.2102 High Low
cufflinks 49.7948 2.69019 96.8995 High High

0 Strain