Gene : Cre04.g215450 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  154
Name:  ? Cre04.g215450 Secondary Identifier:  ? PAC:30791582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g215450 0.5kb upstream 0.5kb upstream 2982 true chromosome_4: 1202235-1205216 Chlamydomonas reinhardtii
Cre04.g215450 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1202235-1202734 Chlamydomonas reinhardtii
Cre04.g215450 0.5kb downstream 0.5kb downstream 2982 true chromosome_4: 1202735-1205716 Chlamydomonas reinhardtii
Cre04.g215450 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1205217-1205716 Chlamydomonas reinhardtii
Cre04.g215450 1.0kb upstream 1.0kb upstream 3482 true chromosome_4: 1201735-1205216 Chlamydomonas reinhardtii
Cre04.g215450 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1201735-1202734 Chlamydomonas reinhardtii
Cre04.g215450 1.0kb downstream 1.0kb downstream 3482 true chromosome_4: 1202735-1206216 Chlamydomonas reinhardtii
Cre04.g215450 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1205217-1206216 Chlamydomonas reinhardtii
Cre04.g215450 2.0kb upstream 2.0kb upstream 4482 true chromosome_4: 1200735-1205216 Chlamydomonas reinhardtii
Cre04.g215450 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1200735-1202734 Chlamydomonas reinhardtii
Cre04.g215450 2.0kb downstream 2.0kb downstream 4482 true chromosome_4: 1202735-1207216 Chlamydomonas reinhardtii
Cre04.g215450 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1205217-1207216 Chlamydomonas reinhardtii
Cre04.g215450 5.0kb upstream 5.0kb upstream 7482 true chromosome_4: 1197735-1205216 Chlamydomonas reinhardtii
Cre04.g215450 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1197735-1202734 Chlamydomonas reinhardtii
Cre04.g215450 5.0kb downstream 5.0kb downstream 7482 true chromosome_4: 1202735-1210216 Chlamydomonas reinhardtii
Cre04.g215450 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1205217-1210216 Chlamydomonas reinhardtii
Cre04.g215450 10.0kb upstream 10.0kb upstream 12482 true chromosome_4: 1192735-1205216 Chlamydomonas reinhardtii
Cre04.g215450 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1192735-1202734 Chlamydomonas reinhardtii
Cre04.g215450 10.0kb downstream 10.0kb downstream 12482 true chromosome_4: 1202735-1215216 Chlamydomonas reinhardtii
Cre04.g215450 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1205217-1215216 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.612       Low
cufflinks 14.762     High  
cufflinks 15.697     High  
cufflinks 15.628     High  
cufflinks 15.35     High  
cufflinks 14.68     High  
cufflinks 18.228     High High
cufflinks 15.35        
cufflinks 8.794       Low
cufflinks 9.982     High  
cufflinks 13.67        
cufflinks 14.368     High  
cufflinks 12.32     High  
cufflinks 14.533     High  
cufflinks 13.694     High  
cufflinks 10.739        
cufflinks 9.912        
cufflinks 15.231     High  
cufflinks 5.783     High Low
cufflinks 11.569        
cufflinks 14.152     High  
cufflinks 10.555        
cufflinks 10.704        
cufflinks 15.538     High  
cufflinks 10.595        
cufflinks 10.2542 1.34311 19.1653    
cufflinks 5.1472 1.08268 9.21172   Low
cufflinks 9.34447 0.0 18.8277    
cufflinks 7.11819 1.14036 13.096   Low
cufflinks 14.1003 2.72913 25.4714   High

0 Strain