Gene : Cre04.g217935 C. reinhardtii v5.6
Defline:  (1 of 1) K11886 - proteasome component ECM29 (ECM29) Genomic Order:  75
Name:  ? Cre04.g217935 Secondary Identifier:  ? PAC:30791378
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g217935 0.5kb upstream 0.5kb upstream 20952 true chromosome_4: 511952-532903 Chlamydomonas reinhardtii
Cre04.g217935 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 511952-512451 Chlamydomonas reinhardtii
Cre04.g217935 0.5kb downstream 0.5kb downstream 20952 true chromosome_4: 512452-533403 Chlamydomonas reinhardtii
Cre04.g217935 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 532904-533403 Chlamydomonas reinhardtii
Cre04.g217935 1.0kb upstream 1.0kb upstream 21452 true chromosome_4: 511452-532903 Chlamydomonas reinhardtii
Cre04.g217935 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 511452-512451 Chlamydomonas reinhardtii
Cre04.g217935 1.0kb downstream 1.0kb downstream 21452 true chromosome_4: 512452-533903 Chlamydomonas reinhardtii
Cre04.g217935 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 532904-533903 Chlamydomonas reinhardtii
Cre04.g217935 2.0kb upstream 2.0kb upstream 22452 true chromosome_4: 510452-532903 Chlamydomonas reinhardtii
Cre04.g217935 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 510452-512451 Chlamydomonas reinhardtii
Cre04.g217935 2.0kb downstream 2.0kb downstream 22452 true chromosome_4: 512452-534903 Chlamydomonas reinhardtii
Cre04.g217935 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 532904-534903 Chlamydomonas reinhardtii
Cre04.g217935 5.0kb upstream 5.0kb upstream 25452 true chromosome_4: 507452-532903 Chlamydomonas reinhardtii
Cre04.g217935 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 507452-512451 Chlamydomonas reinhardtii
Cre04.g217935 5.0kb downstream 5.0kb downstream 25452 true chromosome_4: 512452-537903 Chlamydomonas reinhardtii
Cre04.g217935 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 532904-537903 Chlamydomonas reinhardtii
Cre04.g217935 10.0kb upstream 10.0kb upstream 30452 true chromosome_4: 502452-532903 Chlamydomonas reinhardtii
Cre04.g217935 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 502452-512451 Chlamydomonas reinhardtii
Cre04.g217935 10.0kb downstream 10.0kb downstream 30452 true chromosome_4: 512452-542903 Chlamydomonas reinhardtii
Cre04.g217935 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 532904-542903 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110645 5260 Chlorophyte View MSA
123425052 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low Low
cufflinks 0.347        
cufflinks 0.23        
cufflinks 0.253        
cufflinks 0.248        
cufflinks 0.151     Low  
cufflinks 0.318        
cufflinks 0.339        
cufflinks 0.112        
cufflinks 0.036     Low Low
cufflinks 0.249        
cufflinks 0.375       High
cufflinks 0.013     Low Low
cufflinks 0.195        
cufflinks 0.204        
cufflinks 0.13        
cufflinks 0.138        
cufflinks 0.257        
cufflinks 0.04     Low Low
cufflinks 0.265        
cufflinks 0.222        
cufflinks 0.07     Low  
cufflinks 0.192        
cufflinks 0.259        
cufflinks 0.119        
cufflinks 2.17054 0.367869 3.97321   Low
cufflinks 5.15793 1.37377 8.9421    
cufflinks 1.93143 0.0 4.09964    
cufflinks 2.72038 0.45486 4.98591    
cufflinks 3.01915 0.574271 5.46403    

0 Strain