Gene : Cre04.g217955 C. reinhardtii v5.6
Defline:  (1 of 2) K01079 - phosphoserine phosphatase (serB, PSPH) Genomic Order:  94
Name:  ? Cre04.g217955 Secondary Identifier:  ? PAC:30791587
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii SER-GLYSYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii SERSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g217955 0.5kb upstream 0.5kb upstream 5653 true chromosome_4: 706573-712225 Chlamydomonas reinhardtii
Cre04.g217955 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 711726-712225 Chlamydomonas reinhardtii
Cre04.g217955 0.5kb downstream 0.5kb downstream 5653 true chromosome_4: 706073-711725 Chlamydomonas reinhardtii
Cre04.g217955 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 706073-706572 Chlamydomonas reinhardtii
Cre04.g217955 1.0kb upstream 1.0kb upstream 6153 true chromosome_4: 706573-712725 Chlamydomonas reinhardtii
Cre04.g217955 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 711726-712725 Chlamydomonas reinhardtii
Cre04.g217955 1.0kb downstream 1.0kb downstream 6153 true chromosome_4: 705573-711725 Chlamydomonas reinhardtii
Cre04.g217955 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 705573-706572 Chlamydomonas reinhardtii
Cre04.g217955 2.0kb upstream 2.0kb upstream 7153 true chromosome_4: 706573-713725 Chlamydomonas reinhardtii
Cre04.g217955 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 711726-713725 Chlamydomonas reinhardtii
Cre04.g217955 2.0kb downstream 2.0kb downstream 7153 true chromosome_4: 704573-711725 Chlamydomonas reinhardtii
Cre04.g217955 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 704573-706572 Chlamydomonas reinhardtii
Cre04.g217955 5.0kb upstream 5.0kb upstream 10153 true chromosome_4: 706573-716725 Chlamydomonas reinhardtii
Cre04.g217955 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 711726-716725 Chlamydomonas reinhardtii
Cre04.g217955 5.0kb downstream 5.0kb downstream 10153 true chromosome_4: 701573-711725 Chlamydomonas reinhardtii
Cre04.g217955 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 701573-706572 Chlamydomonas reinhardtii
Cre04.g217955 10.0kb upstream 10.0kb upstream 15153 true chromosome_4: 706573-721725 Chlamydomonas reinhardtii
Cre04.g217955 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 711726-721725 Chlamydomonas reinhardtii
Cre04.g217955 10.0kb downstream 10.0kb downstream 15153 true chromosome_4: 696573-711725 Chlamydomonas reinhardtii
Cre04.g217955 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 696573-706572 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109074 5260 Chlorophyte View MSA
123426809 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.002     Low Low
cufflinks 2.78088 0.437485 5.12428   High
cufflinks 2.89636 0.585845 5.20688    
cufflinks 0.51209 0.0 1.29637   Low
cufflinks 2.08289 0.285149 3.88064   Low
cufflinks 2.04098 0.198858 3.88309    

0 Strain