Gene : INFA C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g218700 Defline:  (1 of 3) PF01176 - Translation initiation factor 1A / IF-1 (eIF-1a)
Genomic Order:  258 Name:  ? Cre04.g218700
Secondary Identifier:  ? PAC:30791022
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g218700 0.5kb upstream 0.5kb upstream 1952 true chromosome_4: 1992611-1994562 Chlamydomonas reinhardtii
Cre04.g218700 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1994063-1994562 Chlamydomonas reinhardtii
Cre04.g218700 0.5kb downstream 0.5kb downstream 1952 true chromosome_4: 1992111-1994062 Chlamydomonas reinhardtii
Cre04.g218700 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1992111-1992610 Chlamydomonas reinhardtii
Cre04.g218700 1.0kb upstream 1.0kb upstream 2452 true chromosome_4: 1992611-1995062 Chlamydomonas reinhardtii
Cre04.g218700 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1994063-1995062 Chlamydomonas reinhardtii
Cre04.g218700 1.0kb downstream 1.0kb downstream 2452 true chromosome_4: 1991611-1994062 Chlamydomonas reinhardtii
Cre04.g218700 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1991611-1992610 Chlamydomonas reinhardtii
Cre04.g218700 2.0kb upstream 2.0kb upstream 3452 true chromosome_4: 1992611-1996062 Chlamydomonas reinhardtii
Cre04.g218700 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1994063-1996062 Chlamydomonas reinhardtii
Cre04.g218700 2.0kb downstream 2.0kb downstream 3452 true chromosome_4: 1990611-1994062 Chlamydomonas reinhardtii
Cre04.g218700 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1990611-1992610 Chlamydomonas reinhardtii
Cre04.g218700 5.0kb upstream 5.0kb upstream 6452 true chromosome_4: 1992611-1999062 Chlamydomonas reinhardtii
Cre04.g218700 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1994063-1999062 Chlamydomonas reinhardtii
Cre04.g218700 5.0kb downstream 5.0kb downstream 6452 true chromosome_4: 1987611-1994062 Chlamydomonas reinhardtii
Cre04.g218700 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1987611-1992610 Chlamydomonas reinhardtii
Cre04.g218700 10.0kb upstream 10.0kb upstream 11452 true chromosome_4: 1992611-2004062 Chlamydomonas reinhardtii
Cre04.g218700 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1994063-2004062 Chlamydomonas reinhardtii
Cre04.g218700 10.0kb downstream 10.0kb downstream 11452 true chromosome_4: 1982611-1994062 Chlamydomonas reinhardtii
Cre04.g218700 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1982611-1992610 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080808 5260 Chlorophyte Singleton cluster - no MSA
123428074 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.851     High High
cufflinks 33.064     High  
cufflinks 15.288     High Low
cufflinks 21.913     High  
cufflinks 36.539     High  
cufflinks 37.205     High  
cufflinks 15.642     High Low
cufflinks 28.936     High  
cufflinks 44.115     High High
cufflinks 19.979     High  
cufflinks 22.16     High  
cufflinks 31.015     High  
cufflinks 34.768     High  
cufflinks 33.281     High  
cufflinks 25.46     High  
cufflinks 49.154     High High
cufflinks 34.669     High  
cufflinks 25.135     High  
cufflinks 12.017     High Low
cufflinks 18.895     High Low
cufflinks 22.963     High  
cufflinks 37.972     High  
cufflinks 20.299     High  
cufflinks 35.7     High  
cufflinks 36.68     High  
cufflinks 68.3749 0.178743 136.571 High Low
cufflinks 42.7997 11.3315 74.2679 High  
cufflinks 16.068 0.0 32.3628    
cufflinks 26.3596 2.56708 50.1521 High Low
cufflinks 48.236 7.39023 89.0818 High  

0 Strain