Gene : Cre04.g220100 C. reinhardtii v5.6
Defline:  (1 of 39) PTHR12298 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED Genomic Order:  292
Name:  ? Cre04.g220100 Secondary Identifier:  ? PAC:30791163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g220100 0.5kb upstream 0.5kb upstream 7792 true chromosome_4: 2238638-2246429 Chlamydomonas reinhardtii
Cre04.g220100 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2238638-2239137 Chlamydomonas reinhardtii
Cre04.g220100 0.5kb downstream 0.5kb downstream 7792 true chromosome_4: 2239138-2246929 Chlamydomonas reinhardtii
Cre04.g220100 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2246430-2246929 Chlamydomonas reinhardtii
Cre04.g220100 1.0kb upstream 1.0kb upstream 8292 true chromosome_4: 2238138-2246429 Chlamydomonas reinhardtii
Cre04.g220100 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2238138-2239137 Chlamydomonas reinhardtii
Cre04.g220100 1.0kb downstream 1.0kb downstream 8292 true chromosome_4: 2239138-2247429 Chlamydomonas reinhardtii
Cre04.g220100 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2246430-2247429 Chlamydomonas reinhardtii
Cre04.g220100 2.0kb upstream 2.0kb upstream 9292 true chromosome_4: 2237138-2246429 Chlamydomonas reinhardtii
Cre04.g220100 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2237138-2239137 Chlamydomonas reinhardtii
Cre04.g220100 2.0kb downstream 2.0kb downstream 9292 true chromosome_4: 2239138-2248429 Chlamydomonas reinhardtii
Cre04.g220100 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2246430-2248429 Chlamydomonas reinhardtii
Cre04.g220100 5.0kb upstream 5.0kb upstream 12292 true chromosome_4: 2234138-2246429 Chlamydomonas reinhardtii
Cre04.g220100 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2234138-2239137 Chlamydomonas reinhardtii
Cre04.g220100 5.0kb downstream 5.0kb downstream 12292 true chromosome_4: 2239138-2251429 Chlamydomonas reinhardtii
Cre04.g220100 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2246430-2251429 Chlamydomonas reinhardtii
Cre04.g220100 10.0kb upstream 10.0kb upstream 17292 true chromosome_4: 2229138-2246429 Chlamydomonas reinhardtii
Cre04.g220100 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2229138-2239137 Chlamydomonas reinhardtii
Cre04.g220100 10.0kb downstream 10.0kb downstream 17292 true chromosome_4: 2239138-2256429 Chlamydomonas reinhardtii
Cre04.g220100 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2246430-2256429 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081842 5260 Chlorophyte View MSA
123399548 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.573       Low
cufflinks 1.242        
cufflinks 1.402        
cufflinks 1.692        
cufflinks 0.934        
cufflinks 1.089        
cufflinks 1.346        
cufflinks 1.954       High
cufflinks 0.706        
cufflinks 0.294       Low
cufflinks 2.004       High
cufflinks 1.639        
cufflinks 0.647       Low
cufflinks 0.876        
cufflinks 1.28        
cufflinks 0.912        
cufflinks 1.273        
cufflinks 1.257        
cufflinks 0.401       Low
cufflinks 2.121       High
cufflinks 1.643        
cufflinks 1.3        
cufflinks 1.0        
cufflinks 2.53       High
cufflinks 1.703        
cufflinks 0.980741 0.0810915 1.88039   High
cufflinks 1.03416 0.0 2.0786   Low
cufflinks 2.53984 0.0 5.28068   High
cufflinks 1.77137 0.266645 3.2761    
cufflinks 1.46178 0.121563 2.802   Low

0 Strain