Gene : HLM9 C. reinhardtii v5.6
Primary Identifier:  ? Cre04.g223000 Defline:  (1 of 1) PTHR13950 - RABCONNECTIN-RELATED
Genomic Order:  355 Name:  ? Cre04.g223000
Secondary Identifier:  ? PAC:30791194
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g223000 0.5kb upstream 0.5kb upstream 21091 true chromosome_4: 2634873-2655963 Chlamydomonas reinhardtii
Cre04.g223000 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2634873-2635372 Chlamydomonas reinhardtii
Cre04.g223000 0.5kb downstream 0.5kb downstream 21091 true chromosome_4: 2635373-2656463 Chlamydomonas reinhardtii
Cre04.g223000 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2655964-2656463 Chlamydomonas reinhardtii
Cre04.g223000 1.0kb upstream 1.0kb upstream 21591 true chromosome_4: 2634373-2655963 Chlamydomonas reinhardtii
Cre04.g223000 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2634373-2635372 Chlamydomonas reinhardtii
Cre04.g223000 1.0kb downstream 1.0kb downstream 21591 true chromosome_4: 2635373-2656963 Chlamydomonas reinhardtii
Cre04.g223000 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2655964-2656963 Chlamydomonas reinhardtii
Cre04.g223000 2.0kb upstream 2.0kb upstream 22591 true chromosome_4: 2633373-2655963 Chlamydomonas reinhardtii
Cre04.g223000 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2633373-2635372 Chlamydomonas reinhardtii
Cre04.g223000 2.0kb downstream 2.0kb downstream 22591 true chromosome_4: 2635373-2657963 Chlamydomonas reinhardtii
Cre04.g223000 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2655964-2657963 Chlamydomonas reinhardtii
Cre04.g223000 5.0kb upstream 5.0kb upstream 25591 true chromosome_4: 2630373-2655963 Chlamydomonas reinhardtii
Cre04.g223000 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2630373-2635372 Chlamydomonas reinhardtii
Cre04.g223000 5.0kb downstream 5.0kb downstream 25591 true chromosome_4: 2635373-2660963 Chlamydomonas reinhardtii
Cre04.g223000 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2655964-2660963 Chlamydomonas reinhardtii
Cre04.g223000 10.0kb upstream 10.0kb upstream 30591 true chromosome_4: 2625373-2655963 Chlamydomonas reinhardtii
Cre04.g223000 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2625373-2635372 Chlamydomonas reinhardtii
Cre04.g223000 10.0kb downstream 10.0kb downstream 30591 true chromosome_4: 2635373-2665963 Chlamydomonas reinhardtii
Cre04.g223000 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2655964-2665963 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111952 5260 Chlorophyte View MSA
123423357 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.093       Low
cufflinks 0.43        
cufflinks 0.455        
cufflinks 0.456        
cufflinks 0.378        
cufflinks 0.338        
cufflinks 0.521        
cufflinks 0.498        
cufflinks 0.121       Low
cufflinks 0.288        
cufflinks 0.513        
cufflinks 0.625       High
cufflinks 0.366        
cufflinks 0.397        
cufflinks 0.434        
cufflinks 0.237        
cufflinks 0.218        
cufflinks 0.446        
cufflinks 0.215        
cufflinks 0.749       High
cufflinks 0.457        
cufflinks 0.171       Low
cufflinks 0.533        
cufflinks 0.467        
cufflinks 0.254        
cufflinks 1.62149 0.274319 2.96865   High
cufflinks 4.30865 1.17542 7.44189    
cufflinks 1.98803 0.0 4.09241    
cufflinks 3.07408 0.389605 5.75855   High
cufflinks 2.5389 0.505686 4.57212    

0 Strain