Gene : RPL7AE C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g249250 Defline:  (1 of 1) K12845 - U4/U6 small nuclear ribonucleoprotein SNU13 (SNU13, NHP2L)
Genomic Order:  11 Name:  ? Cre06.g249250
Secondary Identifier:  ? PAC:30780174
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g249250 0.5kb upstream 0.5kb upstream 1427 true chromosome_6: 57989-59415 Chlamydomonas reinhardtii
Cre06.g249250 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 58916-59415 Chlamydomonas reinhardtii
Cre06.g249250 0.5kb downstream 0.5kb downstream 1427 true chromosome_6: 57489-58915 Chlamydomonas reinhardtii
Cre06.g249250 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 57489-57988 Chlamydomonas reinhardtii
Cre06.g249250 1.0kb upstream 1.0kb upstream 1927 true chromosome_6: 57989-59915 Chlamydomonas reinhardtii
Cre06.g249250 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 58916-59915 Chlamydomonas reinhardtii
Cre06.g249250 1.0kb downstream 1.0kb downstream 1927 true chromosome_6: 56989-58915 Chlamydomonas reinhardtii
Cre06.g249250 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 56989-57988 Chlamydomonas reinhardtii
Cre06.g249250 2.0kb upstream 2.0kb upstream 2927 true chromosome_6: 57989-60915 Chlamydomonas reinhardtii
Cre06.g249250 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 58916-60915 Chlamydomonas reinhardtii
Cre06.g249250 2.0kb downstream 2.0kb downstream 2927 true chromosome_6: 55989-58915 Chlamydomonas reinhardtii
Cre06.g249250 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 55989-57988 Chlamydomonas reinhardtii
Cre06.g249250 5.0kb upstream 5.0kb upstream 5927 true chromosome_6: 57989-63915 Chlamydomonas reinhardtii
Cre06.g249250 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 58916-63915 Chlamydomonas reinhardtii
Cre06.g249250 5.0kb downstream 5.0kb downstream 5927 true chromosome_6: 52989-58915 Chlamydomonas reinhardtii
Cre06.g249250 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 52989-57988 Chlamydomonas reinhardtii
Cre06.g249250 10.0kb upstream 10.0kb upstream 10927 true chromosome_6: 57989-68915 Chlamydomonas reinhardtii
Cre06.g249250 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 58916-68915 Chlamydomonas reinhardtii
Cre06.g249250 10.0kb downstream 10.0kb downstream 10927 true chromosome_6: 47989-58915 Chlamydomonas reinhardtii
Cre06.g249250 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 47989-57988 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110186 5260 Chlorophyte View MSA
123423886 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2396.34     High  
cufflinks 1473.05     High  
cufflinks 1766.46     High  
cufflinks 1522.99     High  
cufflinks 1670.33     High  
cufflinks 1834.05     High  
cufflinks 2093.32     High  
cufflinks 1394.48     High  
cufflinks 1871.81     High  
cufflinks 5037.83     High High
cufflinks 2219.59     High  
cufflinks 1626.43     High  
cufflinks 2458.74     High  
cufflinks 1951.39     High  
cufflinks 1890.23     High  
cufflinks 1897.64     High  
cufflinks 720.65     High Low
cufflinks 1694.9     High  
cufflinks 6432.01     High High
cufflinks 2729.2     High  
cufflinks 1760.16     High  
cufflinks 954.294     High Low
cufflinks 3387.45     High High
cufflinks 1927.3     High  
cufflinks 674.59     High Low
cufflinks 2507.68 225.956 4789.41 High High
cufflinks 695.071 118.303 1271.84 High  
cufflinks 1091.72 0.0 2306.89 High  
cufflinks 1450.34 24.909 2875.78 High Low
cufflinks 1570.34 11.3668 3129.32 High  

0 Strain