Gene : SPP1C C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g251550 Defline:  (1 of 3) PTHR33209//PTHR33209:SF1 - FAMILY NOT NAMED // SERINE PROTEASE SPPA, CHLOROPLASTIC
Genomic Order:  61 Name:  ? Cre06.g251550
Secondary Identifier:  ? PAC:30779292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g251550 0.5kb upstream 0.5kb upstream 5956 true chromosome_6: 348449-354404 Chlamydomonas reinhardtii
Cre06.g251550 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 353905-354404 Chlamydomonas reinhardtii
Cre06.g251550 0.5kb downstream 0.5kb downstream 5956 true chromosome_6: 347949-353904 Chlamydomonas reinhardtii
Cre06.g251550 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 347949-348448 Chlamydomonas reinhardtii
Cre06.g251550 1.0kb upstream 1.0kb upstream 6456 true chromosome_6: 348449-354904 Chlamydomonas reinhardtii
Cre06.g251550 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 353905-354904 Chlamydomonas reinhardtii
Cre06.g251550 1.0kb downstream 1.0kb downstream 6456 true chromosome_6: 347449-353904 Chlamydomonas reinhardtii
Cre06.g251550 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 347449-348448 Chlamydomonas reinhardtii
Cre06.g251550 2.0kb upstream 2.0kb upstream 7456 true chromosome_6: 348449-355904 Chlamydomonas reinhardtii
Cre06.g251550 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 353905-355904 Chlamydomonas reinhardtii
Cre06.g251550 2.0kb downstream 2.0kb downstream 7456 true chromosome_6: 346449-353904 Chlamydomonas reinhardtii
Cre06.g251550 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 346449-348448 Chlamydomonas reinhardtii
Cre06.g251550 5.0kb upstream 5.0kb upstream 10456 true chromosome_6: 348449-358904 Chlamydomonas reinhardtii
Cre06.g251550 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 353905-358904 Chlamydomonas reinhardtii
Cre06.g251550 5.0kb downstream 5.0kb downstream 10456 true chromosome_6: 343449-353904 Chlamydomonas reinhardtii
Cre06.g251550 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 343449-348448 Chlamydomonas reinhardtii
Cre06.g251550 10.0kb upstream 10.0kb upstream 15456 true chromosome_6: 348449-363904 Chlamydomonas reinhardtii
Cre06.g251550 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 353905-363904 Chlamydomonas reinhardtii
Cre06.g251550 10.0kb downstream 10.0kb downstream 15456 true chromosome_6: 338449-353904 Chlamydomonas reinhardtii
Cre06.g251550 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 338449-348448 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109432 5260 Chlorophyte View MSA
123424112 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.012     Low  
cufflinks 0.01     Low  
cufflinks 0.005     Low Low
cufflinks 0.014     Low  
cufflinks 0.02     Low  
cufflinks 0.008     Low  
cufflinks 0.012     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.023     Low High
cufflinks 0.015     Low  
cufflinks 0.015     Low  
cufflinks 0.015     Low  
cufflinks 0.02     Low  
cufflinks 0.003     Low Low
cufflinks 0.006     Low  
cufflinks 0.013     Low  
cufflinks 0.067     Low High
cufflinks 0.006     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.005     Low Low
cufflinks 0.0496948 0.0 0.133518 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0458854 0.0 0.124694 Low  
cufflinks 1.14775 0.0 2.36099    

0 Strain