Gene : AP4B4 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g234665 Defline:  (1 of 1) KOG1061 - Vesicle coat complex AP-1/AP-2/AP-4, beta subunit
Genomic Order:  298 Name:  ? Cre05.g234665
Secondary Identifier:  ? PAC:30783487
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g234665 0.5kb upstream 0.5kb upstream 12162 true chromosome_5: 2259210-2271371 Chlamydomonas reinhardtii
Cre05.g234665 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 2259210-2259709 Chlamydomonas reinhardtii
Cre05.g234665 0.5kb downstream 0.5kb downstream 12162 true chromosome_5: 2259710-2271871 Chlamydomonas reinhardtii
Cre05.g234665 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 2271372-2271871 Chlamydomonas reinhardtii
Cre05.g234665 1.0kb upstream 1.0kb upstream 12662 true chromosome_5: 2258710-2271371 Chlamydomonas reinhardtii
Cre05.g234665 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 2258710-2259709 Chlamydomonas reinhardtii
Cre05.g234665 1.0kb downstream 1.0kb downstream 12662 true chromosome_5: 2259710-2272371 Chlamydomonas reinhardtii
Cre05.g234665 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 2271372-2272371 Chlamydomonas reinhardtii
Cre05.g234665 2.0kb upstream 2.0kb upstream 13662 true chromosome_5: 2257710-2271371 Chlamydomonas reinhardtii
Cre05.g234665 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 2257710-2259709 Chlamydomonas reinhardtii
Cre05.g234665 2.0kb downstream 2.0kb downstream 13662 true chromosome_5: 2259710-2273371 Chlamydomonas reinhardtii
Cre05.g234665 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 2271372-2273371 Chlamydomonas reinhardtii
Cre05.g234665 5.0kb upstream 5.0kb upstream 16662 true chromosome_5: 2254710-2271371 Chlamydomonas reinhardtii
Cre05.g234665 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 2254710-2259709 Chlamydomonas reinhardtii
Cre05.g234665 5.0kb downstream 5.0kb downstream 16662 true chromosome_5: 2259710-2276371 Chlamydomonas reinhardtii
Cre05.g234665 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 2271372-2276371 Chlamydomonas reinhardtii
Cre05.g234665 10.0kb upstream 10.0kb upstream 21662 true chromosome_5: 2249710-2271371 Chlamydomonas reinhardtii
Cre05.g234665 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 2249710-2259709 Chlamydomonas reinhardtii
Cre05.g234665 10.0kb downstream 10.0kb downstream 21662 true chromosome_5: 2259710-2281371 Chlamydomonas reinhardtii
Cre05.g234665 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 2271372-2281371 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110177 5260 Chlorophyte View MSA
123428647 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.992        
cufflinks 2.049        
cufflinks 1.953        
cufflinks 1.767        
cufflinks 1.997        
cufflinks 1.962        
cufflinks 2.108        
cufflinks 2.104        
cufflinks 1.104        
cufflinks 0.735       Low
cufflinks 1.454        
cufflinks 2.412        
cufflinks 1.382        
cufflinks 2.261        
cufflinks 1.359        
cufflinks 1.442        
cufflinks 1.365        
cufflinks 1.87        
cufflinks 0.3       Low
cufflinks 2.872       High
cufflinks 1.517        
cufflinks 0.942       Low
cufflinks 2.478       High
cufflinks 1.811        
cufflinks 1.16        
cufflinks 18.9604 0.349128 37.5717   High
cufflinks 8.78508 2.39051 15.1796   High
cufflinks 6.25892 0.0 12.6004    
cufflinks 5.41368 0.780752 10.0466   Low
cufflinks 7.17835 1.41139 12.9453   High

0 Strain