Gene : Cre05.g234657 C. reinhardtii v5.6
Defline:  (1 of 1) 2.7.7.87 - L-threonylcarbamoyladenylate synthase Genomic Order:  290
Name:  ? Cre05.g234657 Secondary Identifier:  ? PAC:30783090
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY0-1587 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g234657 0.5kb upstream 0.5kb upstream 3387 true chromosome_5: 2226690-2230076 Chlamydomonas reinhardtii
Cre05.g234657 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 2226690-2227189 Chlamydomonas reinhardtii
Cre05.g234657 0.5kb downstream 0.5kb downstream 3387 true chromosome_5: 2227190-2230576 Chlamydomonas reinhardtii
Cre05.g234657 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 2230077-2230576 Chlamydomonas reinhardtii
Cre05.g234657 1.0kb upstream 1.0kb upstream 3887 true chromosome_5: 2226190-2230076 Chlamydomonas reinhardtii
Cre05.g234657 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 2226190-2227189 Chlamydomonas reinhardtii
Cre05.g234657 1.0kb downstream 1.0kb downstream 3887 true chromosome_5: 2227190-2231076 Chlamydomonas reinhardtii
Cre05.g234657 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 2230077-2231076 Chlamydomonas reinhardtii
Cre05.g234657 2.0kb upstream 2.0kb upstream 4887 true chromosome_5: 2225190-2230076 Chlamydomonas reinhardtii
Cre05.g234657 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 2225190-2227189 Chlamydomonas reinhardtii
Cre05.g234657 2.0kb downstream 2.0kb downstream 4887 true chromosome_5: 2227190-2232076 Chlamydomonas reinhardtii
Cre05.g234657 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 2230077-2232076 Chlamydomonas reinhardtii
Cre05.g234657 5.0kb upstream 5.0kb upstream 7887 true chromosome_5: 2222190-2230076 Chlamydomonas reinhardtii
Cre05.g234657 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 2222190-2227189 Chlamydomonas reinhardtii
Cre05.g234657 5.0kb downstream 5.0kb downstream 7887 true chromosome_5: 2227190-2235076 Chlamydomonas reinhardtii
Cre05.g234657 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 2230077-2235076 Chlamydomonas reinhardtii
Cre05.g234657 10.0kb upstream 10.0kb upstream 12887 true chromosome_5: 2217190-2230076 Chlamydomonas reinhardtii
Cre05.g234657 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 2217190-2227189 Chlamydomonas reinhardtii
Cre05.g234657 10.0kb downstream 10.0kb downstream 12887 true chromosome_5: 2227190-2240076 Chlamydomonas reinhardtii
Cre05.g234657 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 2230077-2240076 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077938 5260 Chlorophyte View MSA
123395906 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.537        
cufflinks 2.678       High
cufflinks 1.934        
cufflinks 1.913        
cufflinks 2.201        
cufflinks 1.99        
cufflinks 1.887        
cufflinks 2.019        
cufflinks 1.082        
cufflinks 0.679       Low
cufflinks 1.776        
cufflinks 1.94        
cufflinks 1.515        
cufflinks 2.19        
cufflinks 1.557        
cufflinks 2.506        
cufflinks 0.594       Low
cufflinks 1.811        
cufflinks 0.54       Low
cufflinks 2.06        
cufflinks 1.464        
cufflinks 1.022        
cufflinks 2.014        
cufflinks 2.758       High
cufflinks 0.478       Low
cufflinks 14.4904 1.57366 27.4072   Low
cufflinks 5.54332 1.03154 10.0551    
cufflinks 0.370223 0.0 1.12578   Low
cufflinks 3.10718 0.376465 5.83789   Low
cufflinks 8.34665 1.66457 15.0287   High

0 Strain