Gene : Cre05.g236250 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  335
Name:  ? Cre05.g236250 Secondary Identifier:  ? PAC:30783319
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g236250 0.5kb upstream 0.5kb upstream 14092 true chromosome_5: 2605550-2619641 Chlamydomonas reinhardtii
Cre05.g236250 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 2605550-2606049 Chlamydomonas reinhardtii
Cre05.g236250 0.5kb downstream 0.5kb downstream 14092 true chromosome_5: 2606050-2620141 Chlamydomonas reinhardtii
Cre05.g236250 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 2619642-2620141 Chlamydomonas reinhardtii
Cre05.g236250 1.0kb upstream 1.0kb upstream 14592 true chromosome_5: 2605050-2619641 Chlamydomonas reinhardtii
Cre05.g236250 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 2605050-2606049 Chlamydomonas reinhardtii
Cre05.g236250 1.0kb downstream 1.0kb downstream 14592 true chromosome_5: 2606050-2620641 Chlamydomonas reinhardtii
Cre05.g236250 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 2619642-2620641 Chlamydomonas reinhardtii
Cre05.g236250 2.0kb upstream 2.0kb upstream 15592 true chromosome_5: 2604050-2619641 Chlamydomonas reinhardtii
Cre05.g236250 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 2604050-2606049 Chlamydomonas reinhardtii
Cre05.g236250 2.0kb downstream 2.0kb downstream 15592 true chromosome_5: 2606050-2621641 Chlamydomonas reinhardtii
Cre05.g236250 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 2619642-2621641 Chlamydomonas reinhardtii
Cre05.g236250 5.0kb upstream 5.0kb upstream 18592 true chromosome_5: 2601050-2619641 Chlamydomonas reinhardtii
Cre05.g236250 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 2601050-2606049 Chlamydomonas reinhardtii
Cre05.g236250 5.0kb downstream 5.0kb downstream 18592 true chromosome_5: 2606050-2624641 Chlamydomonas reinhardtii
Cre05.g236250 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 2619642-2624641 Chlamydomonas reinhardtii
Cre05.g236250 10.0kb upstream 10.0kb upstream 23592 true chromosome_5: 2596050-2619641 Chlamydomonas reinhardtii
Cre05.g236250 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 2596050-2606049 Chlamydomonas reinhardtii
Cre05.g236250 10.0kb downstream 10.0kb downstream 23592 true chromosome_5: 2606050-2629641 Chlamydomonas reinhardtii
Cre05.g236250 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 2619642-2629641 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076142 5260 Chlorophyte View MSA
123394261 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low Low
cufflinks 0.577        
cufflinks 0.594        
cufflinks 1.137       High
cufflinks 0.323        
cufflinks 0.318        
cufflinks 0.449        
cufflinks 0.875       High
cufflinks 0.013     Low Low
cufflinks 0.084        
cufflinks 1.032       High
cufflinks 0.495        
cufflinks 0.221        
cufflinks 0.363        
cufflinks 0.731        
cufflinks 0.068     Low Low
cufflinks 0.186        
cufflinks 0.584        
cufflinks 0.076     Low Low
cufflinks 0.166        
cufflinks 0.65        
cufflinks 0.121        
cufflinks 0.145     Low  
cufflinks 0.802        
cufflinks 0.09     Low  
cufflinks 0.205778 0.0 0.425158 Low High
cufflinks 1.17727 0.182311 2.17222    
cufflinks 2.2537 0.0 4.56476   High
cufflinks 0.875309 0.116354 1.63426   High
cufflinks 2.81934 0.56637 5.07232    

0 Strain