Gene : DAE1 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g237400 Defline:  (1 of 1) 5.1.1.7 - Diaminopimelate epimerase
Genomic Order:  364 Name:  ? Cre05.g237400
Secondary Identifier:  ? PAC:30783253
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5097 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g237400 0.5kb upstream 0.5kb upstream 4052 true chromosome_5: 2813270-2817321 Chlamydomonas reinhardtii
Cre05.g237400 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 2813270-2813769 Chlamydomonas reinhardtii
Cre05.g237400 0.5kb downstream 0.5kb downstream 4052 true chromosome_5: 2813770-2817821 Chlamydomonas reinhardtii
Cre05.g237400 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 2817322-2817821 Chlamydomonas reinhardtii
Cre05.g237400 1.0kb upstream 1.0kb upstream 4552 true chromosome_5: 2812770-2817321 Chlamydomonas reinhardtii
Cre05.g237400 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 2812770-2813769 Chlamydomonas reinhardtii
Cre05.g237400 1.0kb downstream 1.0kb downstream 4552 true chromosome_5: 2813770-2818321 Chlamydomonas reinhardtii
Cre05.g237400 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 2817322-2818321 Chlamydomonas reinhardtii
Cre05.g237400 2.0kb upstream 2.0kb upstream 5552 true chromosome_5: 2811770-2817321 Chlamydomonas reinhardtii
Cre05.g237400 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 2811770-2813769 Chlamydomonas reinhardtii
Cre05.g237400 2.0kb downstream 2.0kb downstream 5552 true chromosome_5: 2813770-2819321 Chlamydomonas reinhardtii
Cre05.g237400 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 2817322-2819321 Chlamydomonas reinhardtii
Cre05.g237400 5.0kb upstream 5.0kb upstream 8552 true chromosome_5: 2808770-2817321 Chlamydomonas reinhardtii
Cre05.g237400 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 2808770-2813769 Chlamydomonas reinhardtii
Cre05.g237400 5.0kb downstream 5.0kb downstream 8552 true chromosome_5: 2813770-2822321 Chlamydomonas reinhardtii
Cre05.g237400 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 2817322-2822321 Chlamydomonas reinhardtii
Cre05.g237400 10.0kb upstream 10.0kb upstream 13552 true chromosome_5: 2803770-2817321 Chlamydomonas reinhardtii
Cre05.g237400 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 2803770-2813769 Chlamydomonas reinhardtii
Cre05.g237400 10.0kb downstream 10.0kb downstream 13552 true chromosome_5: 2813770-2827321 Chlamydomonas reinhardtii
Cre05.g237400 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 2817322-2827321 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109994 5260 Chlorophyte View MSA
123423863 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.697     High  
cufflinks 27.084     High  
cufflinks 9.543       Low
cufflinks 9.795       Low
cufflinks 24.668     High  
cufflinks 29.75     High High
cufflinks 26.516     High  
cufflinks 16.138     High  
cufflinks 30.542     High High
cufflinks 32.606     High High
cufflinks 7.307       Low
cufflinks 18.089     High  
cufflinks 20.438     High  
cufflinks 28.528     High  
cufflinks 9.301       Low
cufflinks 34.857     High High
cufflinks 7.485       Low
cufflinks 14.235     High  
cufflinks 14.928     High  
cufflinks 15.122     High  
cufflinks 15.191     High  
cufflinks 8.878       Low
cufflinks 28.965     High High
cufflinks 17.189     High  
cufflinks 8.494       Low
cufflinks 107.908 0.0 221.315 High High
cufflinks 28.5937 6.97033 50.2171 High  
cufflinks 6.34336 0.0 12.8293   Low
cufflinks 28.2141 0.249943 56.1782 High Low
cufflinks 58.3857 3.77164 113.0 High High

0 Strain