Gene : MOT52 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g237100 Defline:  (1 of 1) K16535 - lisH domain-containing protein FOPNL (FOPNL, FOR20)
Genomic Order:  358 Name:  ? Cre05.g237100
Secondary Identifier:  ? PAC:30783251
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g237100 0.5kb upstream 0.5kb upstream 2325 true chromosome_5: 2784480-2786804 Chlamydomonas reinhardtii
Cre05.g237100 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 2784480-2784979 Chlamydomonas reinhardtii
Cre05.g237100 0.5kb downstream 0.5kb downstream 2325 true chromosome_5: 2784980-2787304 Chlamydomonas reinhardtii
Cre05.g237100 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 2786805-2787304 Chlamydomonas reinhardtii
Cre05.g237100 1.0kb upstream 1.0kb upstream 2825 true chromosome_5: 2783980-2786804 Chlamydomonas reinhardtii
Cre05.g237100 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 2783980-2784979 Chlamydomonas reinhardtii
Cre05.g237100 1.0kb downstream 1.0kb downstream 2825 true chromosome_5: 2784980-2787804 Chlamydomonas reinhardtii
Cre05.g237100 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 2786805-2787804 Chlamydomonas reinhardtii
Cre05.g237100 2.0kb upstream 2.0kb upstream 3825 true chromosome_5: 2782980-2786804 Chlamydomonas reinhardtii
Cre05.g237100 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 2782980-2784979 Chlamydomonas reinhardtii
Cre05.g237100 2.0kb downstream 2.0kb downstream 3825 true chromosome_5: 2784980-2788804 Chlamydomonas reinhardtii
Cre05.g237100 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 2786805-2788804 Chlamydomonas reinhardtii
Cre05.g237100 5.0kb upstream 5.0kb upstream 6825 true chromosome_5: 2779980-2786804 Chlamydomonas reinhardtii
Cre05.g237100 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 2779980-2784979 Chlamydomonas reinhardtii
Cre05.g237100 5.0kb downstream 5.0kb downstream 6825 true chromosome_5: 2784980-2791804 Chlamydomonas reinhardtii
Cre05.g237100 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 2786805-2791804 Chlamydomonas reinhardtii
Cre05.g237100 10.0kb upstream 10.0kb upstream 11825 true chromosome_5: 2774980-2786804 Chlamydomonas reinhardtii
Cre05.g237100 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 2774980-2784979 Chlamydomonas reinhardtii
Cre05.g237100 10.0kb downstream 10.0kb downstream 11825 true chromosome_5: 2784980-2796804 Chlamydomonas reinhardtii
Cre05.g237100 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 2786805-2796804 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109331 5260 Chlorophyte View MSA
123427714 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.484        
cufflinks 0.04     Low Low
cufflinks 3.253        
cufflinks 10.0       High
cufflinks 4.677        
cufflinks 1.487        
cufflinks 3.111        
cufflinks 3.977        
cufflinks 5.893        
cufflinks 0.007     Low Low
cufflinks 0.427        
cufflinks 2.968        
cufflinks 1.644        
cufflinks 2.63        
cufflinks 1.706        
cufflinks 2.655        
cufflinks 0.021     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low Low
cufflinks 0.297        
cufflinks 0.839        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 9.733       High
cufflinks 2.695        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.76488 0.0 3.5877    
cufflinks 1.87152 0.0 4.16509    
cufflinks 4.70644 0.0 10.3302    
cufflinks 2.04798 0.0 4.09986    
cufflinks 3.97306 0.283837 7.66229    

0 Strain