Gene : PHC5 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g238650 Defline:  (1 of 70) PF12499 - Pherophorin (DUF3707)
Genomic Order:  404 Name:  ? Cre05.g238650
Secondary Identifier:  ? PAC:30783408
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g238650 0.5kb upstream 0.5kb upstream 5386 true chromosome_5: 3034210-3039595 Chlamydomonas reinhardtii
Cre05.g238650 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 3039096-3039595 Chlamydomonas reinhardtii
Cre05.g238650 0.5kb downstream 0.5kb downstream 5386 true chromosome_5: 3033710-3039095 Chlamydomonas reinhardtii
Cre05.g238650 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 3033710-3034209 Chlamydomonas reinhardtii
Cre05.g238650 1.0kb upstream 1.0kb upstream 5886 true chromosome_5: 3034210-3040095 Chlamydomonas reinhardtii
Cre05.g238650 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 3039096-3040095 Chlamydomonas reinhardtii
Cre05.g238650 1.0kb downstream 1.0kb downstream 5886 true chromosome_5: 3033210-3039095 Chlamydomonas reinhardtii
Cre05.g238650 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 3033210-3034209 Chlamydomonas reinhardtii
Cre05.g238650 2.0kb upstream 2.0kb upstream 6886 true chromosome_5: 3034210-3041095 Chlamydomonas reinhardtii
Cre05.g238650 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 3039096-3041095 Chlamydomonas reinhardtii
Cre05.g238650 2.0kb downstream 2.0kb downstream 6886 true chromosome_5: 3032210-3039095 Chlamydomonas reinhardtii
Cre05.g238650 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 3032210-3034209 Chlamydomonas reinhardtii
Cre05.g238650 5.0kb upstream 5.0kb upstream 9886 true chromosome_5: 3034210-3044095 Chlamydomonas reinhardtii
Cre05.g238650 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 3039096-3044095 Chlamydomonas reinhardtii
Cre05.g238650 5.0kb downstream 5.0kb downstream 9886 true chromosome_5: 3029210-3039095 Chlamydomonas reinhardtii
Cre05.g238650 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 3029210-3034209 Chlamydomonas reinhardtii
Cre05.g238650 10.0kb upstream 10.0kb upstream 14886 true chromosome_5: 3034210-3049095 Chlamydomonas reinhardtii
Cre05.g238650 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 3039096-3049095 Chlamydomonas reinhardtii
Cre05.g238650 10.0kb downstream 10.0kb downstream 14886 true chromosome_5: 3024210-3039095 Chlamydomonas reinhardtii
Cre05.g238650 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 3024210-3034209 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124078325 5260 Chlorophyte View MSA
123396259 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.808     High Low
cufflinks 57.742     High High
cufflinks 42.318     High  
cufflinks 69.242     High High
cufflinks 50.291     High  
cufflinks 38.391     High  
cufflinks 38.893     High  
cufflinks 38.678     High  
cufflinks 17.755     High  
cufflinks 16.262     High  
cufflinks 107.899     High High
cufflinks 37.858     High  
cufflinks 15.539     High Low
cufflinks 51.925     High  
cufflinks 48.334     High  
cufflinks 15.853     High  
cufflinks 21.603     High  
cufflinks 40.709     High  
cufflinks 9.352     High Low
cufflinks 8.856       Low
cufflinks 50.546     High  
cufflinks 28.981     High  
cufflinks 15.437     High Low
cufflinks 22.966     High  
cufflinks 26.641     High  
cufflinks 137.523 0.0 277.514 High High
cufflinks 41.3078 8.03592 74.5797 High  
cufflinks 55.9576 0.0 117.139 High  
cufflinks 221.333 8.45899 434.207 High  
cufflinks 162.63 1.40925 323.85 High  

0 Strain