Gene : Cre05.g238322 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR10055//PTHR10055:SF9 - TRYPTOPHANYL-TRNA SYNTHETASE // PROTEIN OVULE ABORTION 4 Genomic Order:  393
Name:  ? Cre05.g238322 Secondary Identifier:  ? PAC:30783171
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii TRNA-CHARGING-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g238322 0.5kb upstream 0.5kb upstream 7586 true chromosome_5: 2969289-2976874 Chlamydomonas reinhardtii
Cre05.g238322 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 2976375-2976874 Chlamydomonas reinhardtii
Cre05.g238322 0.5kb downstream 0.5kb downstream 7586 true chromosome_5: 2968789-2976374 Chlamydomonas reinhardtii
Cre05.g238322 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 2968789-2969288 Chlamydomonas reinhardtii
Cre05.g238322 1.0kb upstream 1.0kb upstream 8086 true chromosome_5: 2969289-2977374 Chlamydomonas reinhardtii
Cre05.g238322 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 2976375-2977374 Chlamydomonas reinhardtii
Cre05.g238322 1.0kb downstream 1.0kb downstream 8086 true chromosome_5: 2968289-2976374 Chlamydomonas reinhardtii
Cre05.g238322 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 2968289-2969288 Chlamydomonas reinhardtii
Cre05.g238322 2.0kb upstream 2.0kb upstream 9086 true chromosome_5: 2969289-2978374 Chlamydomonas reinhardtii
Cre05.g238322 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 2976375-2978374 Chlamydomonas reinhardtii
Cre05.g238322 2.0kb downstream 2.0kb downstream 9086 true chromosome_5: 2967289-2976374 Chlamydomonas reinhardtii
Cre05.g238322 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 2967289-2969288 Chlamydomonas reinhardtii
Cre05.g238322 5.0kb upstream 5.0kb upstream 12086 true chromosome_5: 2969289-2981374 Chlamydomonas reinhardtii
Cre05.g238322 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 2976375-2981374 Chlamydomonas reinhardtii
Cre05.g238322 5.0kb downstream 5.0kb downstream 12086 true chromosome_5: 2964289-2976374 Chlamydomonas reinhardtii
Cre05.g238322 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 2964289-2969288 Chlamydomonas reinhardtii
Cre05.g238322 10.0kb upstream 10.0kb upstream 17086 true chromosome_5: 2969289-2986374 Chlamydomonas reinhardtii
Cre05.g238322 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 2976375-2986374 Chlamydomonas reinhardtii
Cre05.g238322 10.0kb downstream 10.0kb downstream 17086 true chromosome_5: 2959289-2976374 Chlamydomonas reinhardtii
Cre05.g238322 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 2959289-2969288 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109319 5260 Chlorophyte View MSA
123423978 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.569        
cufflinks 6.047        
cufflinks 2.891        
cufflinks 5.099        
cufflinks 6.637        
cufflinks 5.741        
cufflinks 2.634        
cufflinks 5.6        
cufflinks 9.829       High
cufflinks 2.331       Low
cufflinks 4.596        
cufflinks 5.915        
cufflinks 2.549       Low
cufflinks 6.091        
cufflinks 4.628        
cufflinks 13.08     High High
cufflinks 9.015        
cufflinks 4.681        
cufflinks 0.67       Low
cufflinks 2.39       Low
cufflinks 4.883        
cufflinks 9.87       High
cufflinks 2.873        
cufflinks 6.121        
cufflinks 9.203       High
cufflinks 14.9696 1.15067 28.7885    
cufflinks 21.4034 5.4869 37.3199    
cufflinks 4.69805 0.0 9.65963   Low
cufflinks 9.6834 1.13338 18.2334   Low
cufflinks 16.9103 2.96142 30.8593   High

0 Strain