Gene : RSP4 C. reinhardtii v5.6
Primary Identifier:  ? Cre05.g242500 Defline:  (1 of 2) PTHR13159 - RADIAL SPOKEHEAD-RELATED
Genomic Order:  218 Name:  ? Cre05.g242500
Secondary Identifier:  ? PAC:30783108
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre05.g242500 0.5kb upstream 0.5kb upstream 3734 true chromosome_5: 1757011-1760744 Chlamydomonas reinhardtii
Cre05.g242500 0.5kb upstream 0.5kb upstream 500 false chromosome_5: 1760245-1760744 Chlamydomonas reinhardtii
Cre05.g242500 0.5kb downstream 0.5kb downstream 3734 true chromosome_5: 1756511-1760244 Chlamydomonas reinhardtii
Cre05.g242500 0.5kb downstream 0.5kb downstream 500 false chromosome_5: 1756511-1757010 Chlamydomonas reinhardtii
Cre05.g242500 1.0kb upstream 1.0kb upstream 4234 true chromosome_5: 1757011-1761244 Chlamydomonas reinhardtii
Cre05.g242500 1.0kb upstream 1.0kb upstream 1000 false chromosome_5: 1760245-1761244 Chlamydomonas reinhardtii
Cre05.g242500 1.0kb downstream 1.0kb downstream 4234 true chromosome_5: 1756011-1760244 Chlamydomonas reinhardtii
Cre05.g242500 1.0kb downstream 1.0kb downstream 1000 false chromosome_5: 1756011-1757010 Chlamydomonas reinhardtii
Cre05.g242500 2.0kb upstream 2.0kb upstream 5234 true chromosome_5: 1757011-1762244 Chlamydomonas reinhardtii
Cre05.g242500 2.0kb upstream 2.0kb upstream 2000 false chromosome_5: 1760245-1762244 Chlamydomonas reinhardtii
Cre05.g242500 2.0kb downstream 2.0kb downstream 5234 true chromosome_5: 1755011-1760244 Chlamydomonas reinhardtii
Cre05.g242500 2.0kb downstream 2.0kb downstream 2000 false chromosome_5: 1755011-1757010 Chlamydomonas reinhardtii
Cre05.g242500 5.0kb upstream 5.0kb upstream 8234 true chromosome_5: 1757011-1765244 Chlamydomonas reinhardtii
Cre05.g242500 5.0kb upstream 5.0kb upstream 5000 false chromosome_5: 1760245-1765244 Chlamydomonas reinhardtii
Cre05.g242500 5.0kb downstream 5.0kb downstream 8234 true chromosome_5: 1752011-1760244 Chlamydomonas reinhardtii
Cre05.g242500 5.0kb downstream 5.0kb downstream 5000 false chromosome_5: 1752011-1757010 Chlamydomonas reinhardtii
Cre05.g242500 10.0kb upstream 10.0kb upstream 13234 true chromosome_5: 1757011-1770244 Chlamydomonas reinhardtii
Cre05.g242500 10.0kb upstream 10.0kb upstream 10000 false chromosome_5: 1760245-1770244 Chlamydomonas reinhardtii
Cre05.g242500 10.0kb downstream 10.0kb downstream 13234 true chromosome_5: 1747011-1760244 Chlamydomonas reinhardtii
Cre05.g242500 10.0kb downstream 10.0kb downstream 10000 false chromosome_5: 1747011-1757010 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109595 5260 Chlorophyte View MSA
123427233 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.805       Low
cufflinks 14.228        
cufflinks 20.644     High High
cufflinks 29.847     High High
cufflinks 9.747        
cufflinks 10.432        
cufflinks 11.018        
cufflinks 16.651     High  
cufflinks 3.9       Low
cufflinks 5.803        
cufflinks 35.61     High High
cufflinks 14.882     High  
cufflinks 5.578        
cufflinks 11.069        
cufflinks 23.866     High High
cufflinks 4.228       Low
cufflinks 6.279        
cufflinks 14.534     High  
cufflinks 4.757       Low
cufflinks 13.615     High  
cufflinks 19.96     High  
cufflinks 4.408       Low
cufflinks 12.485        
cufflinks 14.242        
cufflinks 3.404       Low
cufflinks 16.9801 1.70801 32.2521    
cufflinks 21.9998 6.00639 37.9932    
cufflinks 27.5214 0.0 55.5462 High  
cufflinks 16.886 1.71308 32.0589    
cufflinks 26.892 4.53591 49.2482   Low

0 Strain