Gene : Cre06.g278199 C. reinhardtii v5.6
Defline:  (1 of 5) 1.13.11.75 - All-trans-8'-apo-beta-carotenal 15,15'-oxygenase / 8'-apo-beta-carotenal 15,15'-oxygenase Genomic Order:  758
Name:  ? Cre06.g278199 Secondary Identifier:  ? PAC:30778785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g278199 0.5kb upstream 0.5kb upstream 6272 true chromosome_6: 3999090-4005361 Chlamydomonas reinhardtii
Cre06.g278199 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 4004862-4005361 Chlamydomonas reinhardtii
Cre06.g278199 0.5kb downstream 0.5kb downstream 6272 true chromosome_6: 3998590-4004861 Chlamydomonas reinhardtii
Cre06.g278199 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 3998590-3999089 Chlamydomonas reinhardtii
Cre06.g278199 1.0kb upstream 1.0kb upstream 6772 true chromosome_6: 3999090-4005861 Chlamydomonas reinhardtii
Cre06.g278199 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 4004862-4005861 Chlamydomonas reinhardtii
Cre06.g278199 1.0kb downstream 1.0kb downstream 6772 true chromosome_6: 3998090-4004861 Chlamydomonas reinhardtii
Cre06.g278199 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 3998090-3999089 Chlamydomonas reinhardtii
Cre06.g278199 2.0kb upstream 2.0kb upstream 7772 true chromosome_6: 3999090-4006861 Chlamydomonas reinhardtii
Cre06.g278199 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 4004862-4006861 Chlamydomonas reinhardtii
Cre06.g278199 2.0kb downstream 2.0kb downstream 7772 true chromosome_6: 3997090-4004861 Chlamydomonas reinhardtii
Cre06.g278199 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 3997090-3999089 Chlamydomonas reinhardtii
Cre06.g278199 5.0kb upstream 5.0kb upstream 10772 true chromosome_6: 3999090-4009861 Chlamydomonas reinhardtii
Cre06.g278199 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 4004862-4009861 Chlamydomonas reinhardtii
Cre06.g278199 5.0kb downstream 5.0kb downstream 10772 true chromosome_6: 3994090-4004861 Chlamydomonas reinhardtii
Cre06.g278199 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 3994090-3999089 Chlamydomonas reinhardtii
Cre06.g278199 10.0kb upstream 10.0kb upstream 15772 true chromosome_6: 3999090-4014861 Chlamydomonas reinhardtii
Cre06.g278199 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 4004862-4014861 Chlamydomonas reinhardtii
Cre06.g278199 10.0kb downstream 10.0kb downstream 15772 true chromosome_6: 3989090-4004861 Chlamydomonas reinhardtii
Cre06.g278199 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 3989090-3999089 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124085855 5260 Chlorophyte View MSA
123428919 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.825        
cufflinks 0.893        
cufflinks 0.749        
cufflinks 0.217        
cufflinks 0.486        
cufflinks 0.74        
cufflinks 1.108        
cufflinks 0.003     Low Low
cufflinks 0.019     Low Low
cufflinks 0.345        
cufflinks 0.738        
cufflinks 0.566        
cufflinks 0.338        
cufflinks 0.435        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.519        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  
cufflinks 0.116     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.042       High
cufflinks 0.611        
cufflinks 0.003     Low Low
cufflinks 0.517079 0.0 1.09311   Low
cufflinks 1.16971 0.0 2.66553    
cufflinks 4.52715 0.0 9.66033   High
cufflinks 1.38197 0.0325239 2.73141    
cufflinks 1.54807 0.0 3.15793    

0 Strain