Gene : MRPL16 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g278224 Defline:  (1 of 1) K02878 - large subunit ribosomal protein L16 (RP-L16, MRPL16, rplP)
Genomic Order:  782 Name:  ? Cre06.g278224
Secondary Identifier:  ? PAC:30779630
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g278224 0.5kb upstream 0.5kb upstream 2674 true chromosome_6: 4125420-4128093 Chlamydomonas reinhardtii
Cre06.g278224 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 4127594-4128093 Chlamydomonas reinhardtii
Cre06.g278224 0.5kb downstream 0.5kb downstream 2674 true chromosome_6: 4124920-4127593 Chlamydomonas reinhardtii
Cre06.g278224 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 4124920-4125419 Chlamydomonas reinhardtii
Cre06.g278224 1.0kb upstream 1.0kb upstream 3174 true chromosome_6: 4125420-4128593 Chlamydomonas reinhardtii
Cre06.g278224 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 4127594-4128593 Chlamydomonas reinhardtii
Cre06.g278224 1.0kb downstream 1.0kb downstream 3174 true chromosome_6: 4124420-4127593 Chlamydomonas reinhardtii
Cre06.g278224 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 4124420-4125419 Chlamydomonas reinhardtii
Cre06.g278224 2.0kb upstream 2.0kb upstream 4174 true chromosome_6: 4125420-4129593 Chlamydomonas reinhardtii
Cre06.g278224 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 4127594-4129593 Chlamydomonas reinhardtii
Cre06.g278224 2.0kb downstream 2.0kb downstream 4174 true chromosome_6: 4123420-4127593 Chlamydomonas reinhardtii
Cre06.g278224 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 4123420-4125419 Chlamydomonas reinhardtii
Cre06.g278224 5.0kb upstream 5.0kb upstream 7174 true chromosome_6: 4125420-4132593 Chlamydomonas reinhardtii
Cre06.g278224 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 4127594-4132593 Chlamydomonas reinhardtii
Cre06.g278224 5.0kb downstream 5.0kb downstream 7174 true chromosome_6: 4120420-4127593 Chlamydomonas reinhardtii
Cre06.g278224 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 4120420-4125419 Chlamydomonas reinhardtii
Cre06.g278224 10.0kb upstream 10.0kb upstream 12174 true chromosome_6: 4125420-4137593 Chlamydomonas reinhardtii
Cre06.g278224 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 4127594-4137593 Chlamydomonas reinhardtii
Cre06.g278224 10.0kb downstream 10.0kb downstream 12174 true chromosome_6: 4115420-4127593 Chlamydomonas reinhardtii
Cre06.g278224 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 4115420-4125419 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124077973 5260 Chlorophyte Singleton cluster - no MSA
123429161 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.825        
cufflinks 4.304       High
cufflinks 1.637        
cufflinks 1.114       Low
cufflinks 5.657       High
cufflinks 3.769        
cufflinks 3.534        
cufflinks 2.105        
cufflinks 3.919       High
cufflinks 2.014        
cufflinks 0.674       Low
cufflinks 2.387        
cufflinks 2.706        
cufflinks 3.878       High
cufflinks 1.769        
cufflinks 3.063        
cufflinks 2.119        
cufflinks 2.302        
cufflinks 0.525       Low
cufflinks 0.71       Low
cufflinks 2.261        
cufflinks 1.78        
cufflinks 1.169        
cufflinks 1.793        
cufflinks 2.473        
cufflinks 2.64014 0.127304 5.15298    
cufflinks 5.72424 0.629814 10.8187    
cufflinks 4.39671 0.0 9.68928    
cufflinks 2.24325 0.0591736 4.42733    
cufflinks 6.30611 0.725616 11.8866   High

0 Strain