Gene : PBA1 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g279000 Defline:  (1 of 2) K02738 - 20S proteasome subunit beta 1 (PSMB6)
Genomic Order:  877 Name:  ? Cre06.g279000
Secondary Identifier:  ? PAC:30779585
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g279000 0.5kb upstream 0.5kb upstream 2750 true chromosome_6: 4879212-4881961 Chlamydomonas reinhardtii
Cre06.g279000 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 4879212-4879711 Chlamydomonas reinhardtii
Cre06.g279000 0.5kb downstream 0.5kb downstream 2750 true chromosome_6: 4879712-4882461 Chlamydomonas reinhardtii
Cre06.g279000 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 4881962-4882461 Chlamydomonas reinhardtii
Cre06.g279000 1.0kb upstream 1.0kb upstream 3250 true chromosome_6: 4878712-4881961 Chlamydomonas reinhardtii
Cre06.g279000 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 4878712-4879711 Chlamydomonas reinhardtii
Cre06.g279000 1.0kb downstream 1.0kb downstream 3250 true chromosome_6: 4879712-4882961 Chlamydomonas reinhardtii
Cre06.g279000 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 4881962-4882961 Chlamydomonas reinhardtii
Cre06.g279000 2.0kb upstream 2.0kb upstream 4250 true chromosome_6: 4877712-4881961 Chlamydomonas reinhardtii
Cre06.g279000 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 4877712-4879711 Chlamydomonas reinhardtii
Cre06.g279000 2.0kb downstream 2.0kb downstream 4250 true chromosome_6: 4879712-4883961 Chlamydomonas reinhardtii
Cre06.g279000 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 4881962-4883961 Chlamydomonas reinhardtii
Cre06.g279000 5.0kb upstream 5.0kb upstream 7250 true chromosome_6: 4874712-4881961 Chlamydomonas reinhardtii
Cre06.g279000 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 4874712-4879711 Chlamydomonas reinhardtii
Cre06.g279000 5.0kb downstream 5.0kb downstream 7250 true chromosome_6: 4879712-4886961 Chlamydomonas reinhardtii
Cre06.g279000 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 4881962-4886961 Chlamydomonas reinhardtii
Cre06.g279000 10.0kb upstream 10.0kb upstream 12250 true chromosome_6: 4869712-4881961 Chlamydomonas reinhardtii
Cre06.g279000 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 4869712-4879711 Chlamydomonas reinhardtii
Cre06.g279000 10.0kb downstream 10.0kb downstream 12250 true chromosome_6: 4879712-4891961 Chlamydomonas reinhardtii
Cre06.g279000 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 4881962-4891961 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111262 5260 Chlorophyte View MSA
123423963 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.941     High  
cufflinks 20.521     High  
cufflinks 31.77     High  
cufflinks 35.536     High High
cufflinks 27.104     High  
cufflinks 31.043     High  
cufflinks 28.215     High  
cufflinks 36.517     High High
cufflinks 28.545     High  
cufflinks 18.583     High  
cufflinks 17.294     High  
cufflinks 24.462     High  
cufflinks 30.161     High  
cufflinks 29.576     High  
cufflinks 17.992     High  
cufflinks 22.505     High  
cufflinks 9.002       Low
cufflinks 29.166     High  
cufflinks 11.864     High Low
cufflinks 17.361     High  
cufflinks 15.833     High  
cufflinks 10.738       Low
cufflinks 28.123     High  
cufflinks 23.1     High  
cufflinks 10.622       Low
cufflinks 22.6047 2.19428 43.0152   Low
cufflinks 30.9729 8.34956 53.5962 High  
cufflinks 43.799 0.0 88.986 High  
cufflinks 18.1522 2.07617 34.2283   Low
cufflinks 31.9415 5.25411 58.6288 High  

0 Strain