Gene : PBG1 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g280850 Defline:  (1 of 1) K02736 - 20S proteasome subunit beta 7 (PSMB4)
Genomic Order:  920 Name:  ? Cre06.g280850
Secondary Identifier:  ? PAC:30780030
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g280850 0.5kb upstream 0.5kb upstream 2337 true chromosome_6: 5093145-5095481 Chlamydomonas reinhardtii
Cre06.g280850 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 5094982-5095481 Chlamydomonas reinhardtii
Cre06.g280850 0.5kb downstream 0.5kb downstream 2337 true chromosome_6: 5092645-5094981 Chlamydomonas reinhardtii
Cre06.g280850 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 5092645-5093144 Chlamydomonas reinhardtii
Cre06.g280850 1.0kb upstream 1.0kb upstream 2837 true chromosome_6: 5093145-5095981 Chlamydomonas reinhardtii
Cre06.g280850 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 5094982-5095981 Chlamydomonas reinhardtii
Cre06.g280850 1.0kb downstream 1.0kb downstream 2837 true chromosome_6: 5092145-5094981 Chlamydomonas reinhardtii
Cre06.g280850 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 5092145-5093144 Chlamydomonas reinhardtii
Cre06.g280850 2.0kb upstream 2.0kb upstream 3837 true chromosome_6: 5093145-5096981 Chlamydomonas reinhardtii
Cre06.g280850 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 5094982-5096981 Chlamydomonas reinhardtii
Cre06.g280850 2.0kb downstream 2.0kb downstream 3837 true chromosome_6: 5091145-5094981 Chlamydomonas reinhardtii
Cre06.g280850 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 5091145-5093144 Chlamydomonas reinhardtii
Cre06.g280850 5.0kb upstream 5.0kb upstream 6837 true chromosome_6: 5093145-5099981 Chlamydomonas reinhardtii
Cre06.g280850 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 5094982-5099981 Chlamydomonas reinhardtii
Cre06.g280850 5.0kb downstream 5.0kb downstream 6837 true chromosome_6: 5088145-5094981 Chlamydomonas reinhardtii
Cre06.g280850 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 5088145-5093144 Chlamydomonas reinhardtii
Cre06.g280850 10.0kb upstream 10.0kb upstream 11837 true chromosome_6: 5093145-5104981 Chlamydomonas reinhardtii
Cre06.g280850 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 5094982-5104981 Chlamydomonas reinhardtii
Cre06.g280850 10.0kb downstream 10.0kb downstream 11837 true chromosome_6: 5083145-5094981 Chlamydomonas reinhardtii
Cre06.g280850 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 5083145-5093144 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109378 5260 Chlorophyte View MSA
123423883 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.519     High  
cufflinks 24.877     High  
cufflinks 27.835     High High
cufflinks 21.189     High  
cufflinks 23.255     High  
cufflinks 23.769     High  
cufflinks 26.675     High High
cufflinks 25.612     High  
cufflinks 18.145     High  
cufflinks 11.721     High Low
cufflinks 16.67     High  
cufflinks 20.135     High  
cufflinks 24.529     High  
cufflinks 26.153     High High
cufflinks 14.714     High  
cufflinks 19.071     High  
cufflinks 13.063     High  
cufflinks 22.51     High  
cufflinks 7.587     High Low
cufflinks 19.589     High  
cufflinks 13.673     High  
cufflinks 10.184       Low
cufflinks 23.384     High  
cufflinks 20.677     High  
cufflinks 10.643       Low
cufflinks 30.1874 2.3476 58.0272 High Low
cufflinks 51.0482 13.3925 88.7039 High  
cufflinks 48.1762 0.0 97.7563 High  
cufflinks 21.6736 2.35955 40.9876   Low
cufflinks 46.7803 6.68396 86.8766 High  

0 Strain