Gene : PRPL29 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g259850 Defline:  Putative chloroplast ribosomal protein L29
Genomic Order:  262 Name:  ? Cre06.g259850
Secondary Identifier:  ? PAC:30779000
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g259850 0.5kb upstream 0.5kb upstream 1386 true chromosome_6: 1518795-1520180 Chlamydomonas reinhardtii
Cre06.g259850 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1518795-1519294 Chlamydomonas reinhardtii
Cre06.g259850 0.5kb downstream 0.5kb downstream 1386 true chromosome_6: 1519295-1520680 Chlamydomonas reinhardtii
Cre06.g259850 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1520181-1520680 Chlamydomonas reinhardtii
Cre06.g259850 1.0kb upstream 1.0kb upstream 1886 true chromosome_6: 1518295-1520180 Chlamydomonas reinhardtii
Cre06.g259850 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1518295-1519294 Chlamydomonas reinhardtii
Cre06.g259850 1.0kb downstream 1.0kb downstream 1886 true chromosome_6: 1519295-1521180 Chlamydomonas reinhardtii
Cre06.g259850 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1520181-1521180 Chlamydomonas reinhardtii
Cre06.g259850 2.0kb upstream 2.0kb upstream 2886 true chromosome_6: 1517295-1520180 Chlamydomonas reinhardtii
Cre06.g259850 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1517295-1519294 Chlamydomonas reinhardtii
Cre06.g259850 2.0kb downstream 2.0kb downstream 2886 true chromosome_6: 1519295-1522180 Chlamydomonas reinhardtii
Cre06.g259850 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1520181-1522180 Chlamydomonas reinhardtii
Cre06.g259850 5.0kb upstream 5.0kb upstream 5886 true chromosome_6: 1514295-1520180 Chlamydomonas reinhardtii
Cre06.g259850 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1514295-1519294 Chlamydomonas reinhardtii
Cre06.g259850 5.0kb downstream 5.0kb downstream 5886 true chromosome_6: 1519295-1525180 Chlamydomonas reinhardtii
Cre06.g259850 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1520181-1525180 Chlamydomonas reinhardtii
Cre06.g259850 10.0kb upstream 10.0kb upstream 10886 true chromosome_6: 1509295-1520180 Chlamydomonas reinhardtii
Cre06.g259850 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1509295-1519294 Chlamydomonas reinhardtii
Cre06.g259850 10.0kb downstream 10.0kb downstream 10886 true chromosome_6: 1519295-1530180 Chlamydomonas reinhardtii
Cre06.g259850 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1520181-1530180 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112965 5260 Chlorophyte View MSA
123424171 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1069.25     High High
cufflinks 331.608     High  
cufflinks 212.962     High  
cufflinks 187.235     High  
cufflinks 406.205     High  
cufflinks 447.777     High  
cufflinks 59.053     High Low
cufflinks 177.602     High  
cufflinks 1090.35     High High
cufflinks 921.008     High High
cufflinks 207.553     High  
cufflinks 235.662     High  
cufflinks 549.999     High  
cufflinks 436.427     High  
cufflinks 238.114     High  
cufflinks 884.524     High High
cufflinks 519.179     High  
cufflinks 313.858     High  
cufflinks 145.513     High Low
cufflinks 79.066     High Low
cufflinks 236.822     High  
cufflinks 534.616     High  
cufflinks 155.44     High  
cufflinks 289.296     High  
cufflinks 466.248     High  
cufflinks 762.787 0.0 1535.02 High High
cufflinks 427.902 76.0283 779.775 High  
cufflinks 49.0146 0.0 98.5001 High Low
cufflinks 266.969 0.0 546.705 High Low
cufflinks 357.121 14.2915 699.95 High  

0 Strain