Gene : LEU2 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g258733 Defline:  (1 of 1) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase
Genomic Order:  239 Name:  ? Cre06.g258733
Secondary Identifier:  ? PAC:30779056
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii BRANCHED-CHAIN-AA-SYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii LEUSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g258733 0.5kb upstream 0.5kb upstream 14282 true chromosome_6: 1366123-1380404 Chlamydomonas reinhardtii
Cre06.g258733 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 1366123-1366622 Chlamydomonas reinhardtii
Cre06.g258733 0.5kb downstream 0.5kb downstream 14282 true chromosome_6: 1366623-1380904 Chlamydomonas reinhardtii
Cre06.g258733 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 1380405-1380904 Chlamydomonas reinhardtii
Cre06.g258733 1.0kb upstream 1.0kb upstream 14782 true chromosome_6: 1365623-1380404 Chlamydomonas reinhardtii
Cre06.g258733 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 1365623-1366622 Chlamydomonas reinhardtii
Cre06.g258733 1.0kb downstream 1.0kb downstream 14782 true chromosome_6: 1366623-1381404 Chlamydomonas reinhardtii
Cre06.g258733 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 1380405-1381404 Chlamydomonas reinhardtii
Cre06.g258733 2.0kb upstream 2.0kb upstream 15782 true chromosome_6: 1364623-1380404 Chlamydomonas reinhardtii
Cre06.g258733 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 1364623-1366622 Chlamydomonas reinhardtii
Cre06.g258733 2.0kb downstream 2.0kb downstream 15782 true chromosome_6: 1366623-1382404 Chlamydomonas reinhardtii
Cre06.g258733 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 1380405-1382404 Chlamydomonas reinhardtii
Cre06.g258733 5.0kb upstream 5.0kb upstream 18782 true chromosome_6: 1361623-1380404 Chlamydomonas reinhardtii
Cre06.g258733 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 1361623-1366622 Chlamydomonas reinhardtii
Cre06.g258733 5.0kb downstream 5.0kb downstream 18782 true chromosome_6: 1366623-1385404 Chlamydomonas reinhardtii
Cre06.g258733 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 1380405-1385404 Chlamydomonas reinhardtii
Cre06.g258733 10.0kb upstream 10.0kb upstream 23782 true chromosome_6: 1356623-1380404 Chlamydomonas reinhardtii
Cre06.g258733 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 1356623-1366622 Chlamydomonas reinhardtii
Cre06.g258733 10.0kb downstream 10.0kb downstream 23782 true chromosome_6: 1366623-1390404 Chlamydomonas reinhardtii
Cre06.g258733 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 1380405-1390404 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110307 5260 Chlorophyte View MSA
123424493 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.415       High
cufflinks 5.023        
cufflinks 3.486        
cufflinks 3.001        
cufflinks 4.897        
cufflinks 4.072        
cufflinks 2.348        
cufflinks 3.044        
cufflinks 6.851       High
cufflinks 1.734       Low
cufflinks 2.747        
cufflinks 2.932        
cufflinks 2.459        
cufflinks 4.713        
cufflinks 2.344        
cufflinks 6.775       High
cufflinks 4.312        
cufflinks 4.514        
cufflinks 0.847       Low
cufflinks 2.29        
cufflinks 2.871        
cufflinks 4.046        
cufflinks 1.669       Low
cufflinks 2.926        
cufflinks 4.326        
cufflinks 138.154 0.0 367.48 High Low
cufflinks 63.9987 0.0 149.623 High  
cufflinks 10.4492 0.0 32.4328   Low
cufflinks 34.2583 0.0 127.617 High Low
cufflinks 53.0896 0.0 134.038 High High

0 Strain