Gene : RPS27A C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g273600 Defline:  (1 of 1) PTHR10666//PTHR10666:SF137 - UBIQUITIN // UBIQUITIN-40S RIBOSOMAL PROTEIN S27A-3
Genomic Order:  559 Name:  ? Cre06.g273600
Secondary Identifier:  ? PAC:30779902
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g273600 0.5kb upstream 0.5kb upstream 1796 true chromosome_6: 3001036-3002831 Chlamydomonas reinhardtii
Cre06.g273600 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 3002332-3002831 Chlamydomonas reinhardtii
Cre06.g273600 0.5kb downstream 0.5kb downstream 1796 true chromosome_6: 3000536-3002331 Chlamydomonas reinhardtii
Cre06.g273600 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 3000536-3001035 Chlamydomonas reinhardtii
Cre06.g273600 1.0kb upstream 1.0kb upstream 2296 true chromosome_6: 3001036-3003331 Chlamydomonas reinhardtii
Cre06.g273600 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 3002332-3003331 Chlamydomonas reinhardtii
Cre06.g273600 1.0kb downstream 1.0kb downstream 2296 true chromosome_6: 3000036-3002331 Chlamydomonas reinhardtii
Cre06.g273600 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 3000036-3001035 Chlamydomonas reinhardtii
Cre06.g273600 2.0kb upstream 2.0kb upstream 3296 true chromosome_6: 3001036-3004331 Chlamydomonas reinhardtii
Cre06.g273600 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 3002332-3004331 Chlamydomonas reinhardtii
Cre06.g273600 2.0kb downstream 2.0kb downstream 3296 true chromosome_6: 2999036-3002331 Chlamydomonas reinhardtii
Cre06.g273600 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 2999036-3001035 Chlamydomonas reinhardtii
Cre06.g273600 5.0kb upstream 5.0kb upstream 6296 true chromosome_6: 3001036-3007331 Chlamydomonas reinhardtii
Cre06.g273600 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 3002332-3007331 Chlamydomonas reinhardtii
Cre06.g273600 5.0kb downstream 5.0kb downstream 6296 true chromosome_6: 2996036-3002331 Chlamydomonas reinhardtii
Cre06.g273600 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 2996036-3001035 Chlamydomonas reinhardtii
Cre06.g273600 10.0kb upstream 10.0kb upstream 11296 true chromosome_6: 3001036-3012331 Chlamydomonas reinhardtii
Cre06.g273600 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 3002332-3012331 Chlamydomonas reinhardtii
Cre06.g273600 10.0kb downstream 10.0kb downstream 11296 true chromosome_6: 2991036-3002331 Chlamydomonas reinhardtii
Cre06.g273600 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 2991036-3001035 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109011 5260 Chlorophyte View MSA
123424740 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3546.08     High  
cufflinks 2403.05     High  
cufflinks 2358.89     High  
cufflinks 2160.27     High Low
cufflinks 2590.96     High  
cufflinks 2716.45     High  
cufflinks 4379.34     High  
cufflinks 2464.27     High  
cufflinks 3369.46     High  
cufflinks 4966.46     High High
cufflinks 2145.91     High Low
cufflinks 2764.14     High  
cufflinks 3823.92     High  
cufflinks 2685.44     High  
cufflinks 2967.29     High  
cufflinks 2854.47     High  
cufflinks 3215.29     High  
cufflinks 2550.54     High  
cufflinks 8797.4     High High
cufflinks 6504.33     High High
cufflinks 2757.71     High  
cufflinks 3298.58     High  
cufflinks 5080.52     High High
cufflinks 2808.55     High  
cufflinks 2517.06     High  
cufflinks 12151.4 5169.9 19133.0 High High
cufflinks 4744.76 293.837 9195.68 High  
cufflinks 3873.05 0.0 8276.66 High Low
cufflinks 7343.28 2333.72 12352.8 High  
cufflinks 3578.46 145.6 7011.33 High Low

0 Strain