Gene : LCL1 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g299800 Defline:  (1 of 1) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase
Genomic Order:  1318 Name:  ? Cre06.g299800
Secondary Identifier:  ? PAC:30778660
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6622 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g299800 0.5kb upstream 0.5kb upstream 7886 true chromosome_6: 7418052-7425937 Chlamydomonas reinhardtii
Cre06.g299800 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 7425438-7425937 Chlamydomonas reinhardtii
Cre06.g299800 0.5kb downstream 0.5kb downstream 7886 true chromosome_6: 7417552-7425437 Chlamydomonas reinhardtii
Cre06.g299800 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 7417552-7418051 Chlamydomonas reinhardtii
Cre06.g299800 1.0kb upstream 1.0kb upstream 8386 true chromosome_6: 7418052-7426437 Chlamydomonas reinhardtii
Cre06.g299800 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 7425438-7426437 Chlamydomonas reinhardtii
Cre06.g299800 1.0kb downstream 1.0kb downstream 8386 true chromosome_6: 7417052-7425437 Chlamydomonas reinhardtii
Cre06.g299800 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 7417052-7418051 Chlamydomonas reinhardtii
Cre06.g299800 2.0kb upstream 2.0kb upstream 9386 true chromosome_6: 7418052-7427437 Chlamydomonas reinhardtii
Cre06.g299800 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 7425438-7427437 Chlamydomonas reinhardtii
Cre06.g299800 2.0kb downstream 2.0kb downstream 9386 true chromosome_6: 7416052-7425437 Chlamydomonas reinhardtii
Cre06.g299800 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 7416052-7418051 Chlamydomonas reinhardtii
Cre06.g299800 5.0kb upstream 5.0kb upstream 12386 true chromosome_6: 7418052-7430437 Chlamydomonas reinhardtii
Cre06.g299800 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 7425438-7430437 Chlamydomonas reinhardtii
Cre06.g299800 5.0kb downstream 5.0kb downstream 12386 true chromosome_6: 7413052-7425437 Chlamydomonas reinhardtii
Cre06.g299800 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 7413052-7418051 Chlamydomonas reinhardtii
Cre06.g299800 10.0kb upstream 10.0kb upstream 17386 true chromosome_6: 7418052-7435437 Chlamydomonas reinhardtii
Cre06.g299800 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 7425438-7435437 Chlamydomonas reinhardtii
Cre06.g299800 10.0kb downstream 10.0kb downstream 17386 true chromosome_6: 7408052-7425437 Chlamydomonas reinhardtii
Cre06.g299800 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 7408052-7418051 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124086039 5260 Chlorophyte View MSA
123427454 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.889        
cufflinks 3.677        
cufflinks 2.648        
cufflinks 1.204       Low
cufflinks 3.79        
cufflinks 3.778        
cufflinks 3.418        
cufflinks 4.508        
cufflinks 4.572        
cufflinks 0.763       Low
cufflinks 1.278       Low
cufflinks 3.22        
cufflinks 3.935        
cufflinks 3.803        
cufflinks 1.715        
cufflinks 8.052       High
cufflinks 7.806       High
cufflinks 2.786        
cufflinks 1.057       Low
cufflinks 4.065        
cufflinks 1.974        
cufflinks 7.605       High
cufflinks 1.548       Low
cufflinks 7.374       High
cufflinks 9.316       High
cufflinks 6.47787 0.921721 12.034   High
cufflinks 22.3587 5.47042 39.2469   High
cufflinks 3.56067 0.0 7.37969   Low
cufflinks 4.02206 0.682298 7.36182    
cufflinks 2.67747 0.399032 4.95591   Low

0 Strain