Gene : RRM5 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g302650 Defline:  (1 of 2) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase
Genomic Order:  1389 Name:  ? Cre06.g302650
Secondary Identifier:  ? PAC:30779722
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g302650 0.5kb upstream 0.5kb upstream 4344 true chromosome_6: 7811454-7815797 Chlamydomonas reinhardtii
Cre06.g302650 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 7811454-7811953 Chlamydomonas reinhardtii
Cre06.g302650 0.5kb downstream 0.5kb downstream 4344 true chromosome_6: 7811954-7816297 Chlamydomonas reinhardtii
Cre06.g302650 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 7815798-7816297 Chlamydomonas reinhardtii
Cre06.g302650 1.0kb upstream 1.0kb upstream 4844 true chromosome_6: 7810954-7815797 Chlamydomonas reinhardtii
Cre06.g302650 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 7810954-7811953 Chlamydomonas reinhardtii
Cre06.g302650 1.0kb downstream 1.0kb downstream 4844 true chromosome_6: 7811954-7816797 Chlamydomonas reinhardtii
Cre06.g302650 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 7815798-7816797 Chlamydomonas reinhardtii
Cre06.g302650 2.0kb upstream 2.0kb upstream 5844 true chromosome_6: 7809954-7815797 Chlamydomonas reinhardtii
Cre06.g302650 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 7809954-7811953 Chlamydomonas reinhardtii
Cre06.g302650 2.0kb downstream 2.0kb downstream 5844 true chromosome_6: 7811954-7817797 Chlamydomonas reinhardtii
Cre06.g302650 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 7815798-7817797 Chlamydomonas reinhardtii
Cre06.g302650 5.0kb upstream 5.0kb upstream 8844 true chromosome_6: 7806954-7815797 Chlamydomonas reinhardtii
Cre06.g302650 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 7806954-7811953 Chlamydomonas reinhardtii
Cre06.g302650 5.0kb downstream 5.0kb downstream 8844 true chromosome_6: 7811954-7820797 Chlamydomonas reinhardtii
Cre06.g302650 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 7815798-7820797 Chlamydomonas reinhardtii
Cre06.g302650 10.0kb upstream 10.0kb upstream 13844 true chromosome_6: 7801954-7815797 Chlamydomonas reinhardtii
Cre06.g302650 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 7801954-7811953 Chlamydomonas reinhardtii
Cre06.g302650 10.0kb downstream 10.0kb downstream 13844 true chromosome_6: 7811954-7825797 Chlamydomonas reinhardtii
Cre06.g302650 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 7815798-7825797 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108937 5260 Chlorophyte View MSA
123424894 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.526        
cufflinks 5.078        
cufflinks 3.244        
cufflinks 4.387        
cufflinks 4.522        
cufflinks 4.281        
cufflinks 4.584        
cufflinks 4.054        
cufflinks 3.393        
cufflinks 2.097       Low
cufflinks 4.742        
cufflinks 4.703        
cufflinks 2.415       Low
cufflinks 4.404        
cufflinks 3.534        
cufflinks 4.995        
cufflinks 1.558       Low
cufflinks 3.826        
cufflinks 2.093       Low
cufflinks 5.125        
cufflinks 3.335        
cufflinks 2.552        
cufflinks 5.26       High
cufflinks 4.95        
cufflinks 1.64       Low
cufflinks 18.3213 2.0415 34.6012   Low
cufflinks 11.0514 2.91473 19.188    
cufflinks 4.96415 0.0 10.5642    
cufflinks 12.2299 1.78258 22.6771   Low
cufflinks 18.5486 3.57591 33.5213   High

0 Strain