Gene : CMP2 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g308500 Defline:  (1 of 1) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1)
Genomic Order:  1521 Name:  ? Cre06.g308500
Secondary Identifier:  ? PAC:30779111
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii ARGSYNBSUB-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii ARGSYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii GLUTAMINDEG-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY0-162 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-4984 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5686 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7211 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g308500 0.5kb upstream 0.5kb upstream 4921 true chromosome_6: 8567385-8572305 Chlamydomonas reinhardtii
Cre06.g308500 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 8567385-8567884 Chlamydomonas reinhardtii
Cre06.g308500 0.5kb downstream 0.5kb downstream 4921 true chromosome_6: 8567885-8572805 Chlamydomonas reinhardtii
Cre06.g308500 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 8572306-8572805 Chlamydomonas reinhardtii
Cre06.g308500 1.0kb upstream 1.0kb upstream 5421 true chromosome_6: 8566885-8572305 Chlamydomonas reinhardtii
Cre06.g308500 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 8566885-8567884 Chlamydomonas reinhardtii
Cre06.g308500 1.0kb downstream 1.0kb downstream 5421 true chromosome_6: 8567885-8573305 Chlamydomonas reinhardtii
Cre06.g308500 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 8572306-8573305 Chlamydomonas reinhardtii
Cre06.g308500 2.0kb upstream 2.0kb upstream 6421 true chromosome_6: 8565885-8572305 Chlamydomonas reinhardtii
Cre06.g308500 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 8565885-8567884 Chlamydomonas reinhardtii
Cre06.g308500 2.0kb downstream 2.0kb downstream 6421 true chromosome_6: 8567885-8574305 Chlamydomonas reinhardtii
Cre06.g308500 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 8572306-8574305 Chlamydomonas reinhardtii
Cre06.g308500 5.0kb upstream 5.0kb upstream 9421 true chromosome_6: 8562885-8572305 Chlamydomonas reinhardtii
Cre06.g308500 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 8562885-8567884 Chlamydomonas reinhardtii
Cre06.g308500 5.0kb downstream 5.0kb downstream 9421 true chromosome_6: 8567885-8577305 Chlamydomonas reinhardtii
Cre06.g308500 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 8572306-8577305 Chlamydomonas reinhardtii
Cre06.g308500 10.0kb upstream 10.0kb upstream 14421 true chromosome_6: 8557885-8572305 Chlamydomonas reinhardtii
Cre06.g308500 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 8557885-8567884 Chlamydomonas reinhardtii
Cre06.g308500 10.0kb downstream 10.0kb downstream 14421 true chromosome_6: 8567885-8582305 Chlamydomonas reinhardtii
Cre06.g308500 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 8572306-8582305 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109140 5260 Chlorophyte View MSA
123423822 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.028     High  
cufflinks 100.46     High  
cufflinks 74.992     High  
cufflinks 128.074     High  
cufflinks 149.997     High  
cufflinks 82.399     High  
cufflinks 66.852     High  
cufflinks 134.108     High  
cufflinks 70.499     High  
cufflinks 23.647     High Low
cufflinks 98.825     High  
cufflinks 79.556     High  
cufflinks 68.777     High  
cufflinks 67.432     High  
cufflinks 76.06     High  
cufflinks 96.901     High  
cufflinks 131.884     High  
cufflinks 102.335     High  
cufflinks 5.984     High Low
cufflinks 4.428       Low
cufflinks 85.922     High  
cufflinks 91.278     High  
cufflinks 31.4     High  
cufflinks 134.34     High  
cufflinks 138.751     High  
cufflinks 209.746 0.0 425.591 High High
cufflinks 188.378 28.8422 347.913 High  
cufflinks 577.747 0.0 1231.14 High High
cufflinks 94.6531 0.0 194.036 High Low
cufflinks 159.684 1.40615 317.962 High  

0 Strain