Gene : Cre06.g311400 C. reinhardtii v5.6
Defline:  (1 of 1) K10848 - DNA excision repair protein ERCC-4 (ERCC4, XPF) Genomic Order:  1581
Name:  ? Cre06.g311400 Secondary Identifier:  ? PAC:30779672
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g311400 0.5kb upstream 0.5kb upstream 8916 true chromosome_6: 8931530-8940445 Chlamydomonas reinhardtii
Cre06.g311400 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 8939946-8940445 Chlamydomonas reinhardtii
Cre06.g311400 0.5kb downstream 0.5kb downstream 8916 true chromosome_6: 8931030-8939945 Chlamydomonas reinhardtii
Cre06.g311400 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 8931030-8931529 Chlamydomonas reinhardtii
Cre06.g311400 1.0kb upstream 1.0kb upstream 9416 true chromosome_6: 8931530-8940945 Chlamydomonas reinhardtii
Cre06.g311400 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 8939946-8940945 Chlamydomonas reinhardtii
Cre06.g311400 1.0kb downstream 1.0kb downstream 9416 true chromosome_6: 8930530-8939945 Chlamydomonas reinhardtii
Cre06.g311400 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 8930530-8931529 Chlamydomonas reinhardtii
Cre06.g311400 2.0kb upstream 2.0kb upstream 10416 true chromosome_6: 8931530-8941945 Chlamydomonas reinhardtii
Cre06.g311400 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 8939946-8941945 Chlamydomonas reinhardtii
Cre06.g311400 2.0kb downstream 2.0kb downstream 10416 true chromosome_6: 8929530-8939945 Chlamydomonas reinhardtii
Cre06.g311400 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 8929530-8931529 Chlamydomonas reinhardtii
Cre06.g311400 5.0kb upstream 5.0kb upstream 13416 true chromosome_6: 8931530-8944945 Chlamydomonas reinhardtii
Cre06.g311400 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 8939946-8944945 Chlamydomonas reinhardtii
Cre06.g311400 5.0kb downstream 5.0kb downstream 13416 true chromosome_6: 8926530-8939945 Chlamydomonas reinhardtii
Cre06.g311400 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 8926530-8931529 Chlamydomonas reinhardtii
Cre06.g311400 10.0kb upstream 10.0kb upstream 18416 true chromosome_6: 8931530-8949945 Chlamydomonas reinhardtii
Cre06.g311400 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 8939946-8949945 Chlamydomonas reinhardtii
Cre06.g311400 10.0kb downstream 10.0kb downstream 18416 true chromosome_6: 8921530-8939945 Chlamydomonas reinhardtii
Cre06.g311400 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 8921530-8931529 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112957 5260 Chlorophyte View MSA
123424869 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.269        
cufflinks 0.429        
cufflinks 0.312        
cufflinks 0.514        
cufflinks 0.428        
cufflinks 0.25        
cufflinks 0.542        
cufflinks 0.661        
cufflinks 0.307        
cufflinks 0.047     Low Low
cufflinks 0.529        
cufflinks 0.593        
cufflinks 0.148       Low
cufflinks 0.226        
cufflinks 0.539        
cufflinks 0.33        
cufflinks 1.268       High
cufflinks 0.315        
cufflinks 0.156       Low
cufflinks 0.503        
cufflinks 0.494        
cufflinks 1.085       High
cufflinks 0.446        
cufflinks 0.74        
cufflinks 1.319       High
cufflinks 0.481653 0.0 0.974907   Low
cufflinks 1.02674 0.0 2.09069   Low
cufflinks 2.49238 0.0 5.19996    
cufflinks 1.14114 0.109397 2.17288    
cufflinks 0.849454 0.0182017 1.68071   Low

0 Strain