Gene : Cre06.g311050 C. reinhardtii v5.6
Defline:  (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  1574
Name:  ? Cre06.g311050 Secondary Identifier:  ? PAC:30778871
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5046 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g311050 0.5kb upstream 0.5kb upstream 5782 true chromosome_6: 8891197-8896978 Chlamydomonas reinhardtii
Cre06.g311050 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 8891197-8891696 Chlamydomonas reinhardtii
Cre06.g311050 0.5kb downstream 0.5kb downstream 5782 true chromosome_6: 8891697-8897478 Chlamydomonas reinhardtii
Cre06.g311050 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 8896979-8897478 Chlamydomonas reinhardtii
Cre06.g311050 1.0kb upstream 1.0kb upstream 6282 true chromosome_6: 8890697-8896978 Chlamydomonas reinhardtii
Cre06.g311050 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 8890697-8891696 Chlamydomonas reinhardtii
Cre06.g311050 1.0kb downstream 1.0kb downstream 6282 true chromosome_6: 8891697-8897978 Chlamydomonas reinhardtii
Cre06.g311050 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 8896979-8897978 Chlamydomonas reinhardtii
Cre06.g311050 2.0kb upstream 2.0kb upstream 7282 true chromosome_6: 8889697-8896978 Chlamydomonas reinhardtii
Cre06.g311050 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 8889697-8891696 Chlamydomonas reinhardtii
Cre06.g311050 2.0kb downstream 2.0kb downstream 7282 true chromosome_6: 8891697-8898978 Chlamydomonas reinhardtii
Cre06.g311050 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 8896979-8898978 Chlamydomonas reinhardtii
Cre06.g311050 5.0kb upstream 5.0kb upstream 10282 true chromosome_6: 8886697-8896978 Chlamydomonas reinhardtii
Cre06.g311050 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 8886697-8891696 Chlamydomonas reinhardtii
Cre06.g311050 5.0kb downstream 5.0kb downstream 10282 true chromosome_6: 8891697-8901978 Chlamydomonas reinhardtii
Cre06.g311050 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 8896979-8901978 Chlamydomonas reinhardtii
Cre06.g311050 10.0kb upstream 10.0kb upstream 15282 true chromosome_6: 8881697-8896978 Chlamydomonas reinhardtii
Cre06.g311050 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 8881697-8891696 Chlamydomonas reinhardtii
Cre06.g311050 10.0kb downstream 10.0kb downstream 15282 true chromosome_6: 8891697-8906978 Chlamydomonas reinhardtii
Cre06.g311050 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 8896979-8906978 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098306 5260 Chlorophyte View MSA
123424966 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.27       Low
cufflinks 0.447        
cufflinks 1.213        
cufflinks 2.193        
cufflinks 0.443        
cufflinks 0.446        
cufflinks 1.895        
cufflinks 3.54        
cufflinks 0.139       Low
cufflinks 0.173       Low
cufflinks 1.738        
cufflinks 2.008        
cufflinks 0.933        
cufflinks 0.443        
cufflinks 1.265        
cufflinks 0.132       Low
cufflinks 6.455       High
cufflinks 0.798        
cufflinks 1.323        
cufflinks 9.494       High
cufflinks 1.286        
cufflinks 4.613       High
cufflinks 1.353        
cufflinks 3.416        
cufflinks 5.331       High
cufflinks 0.266148 0.0 0.59849   Low
cufflinks 3.75705 0.485402 7.0287   Low
cufflinks 7.85326 0.0 15.9388    
cufflinks 7.57816 1.25186 13.9045   High
cufflinks 1.18155 0.0 2.49899   Low

0 Strain