Gene : Cre06.g282950 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12875:SF0 - GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOG Genomic Order:  967
Name:  ? Cre06.g282950 Secondary Identifier:  ? PAC:30779289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g282950 0.5kb upstream 0.5kb upstream 3339 true chromosome_6: 5298790-5302128 Chlamydomonas reinhardtii
Cre06.g282950 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 5298790-5299289 Chlamydomonas reinhardtii
Cre06.g282950 0.5kb downstream 0.5kb downstream 3339 true chromosome_6: 5299290-5302628 Chlamydomonas reinhardtii
Cre06.g282950 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 5302129-5302628 Chlamydomonas reinhardtii
Cre06.g282950 1.0kb upstream 1.0kb upstream 3839 true chromosome_6: 5298290-5302128 Chlamydomonas reinhardtii
Cre06.g282950 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 5298290-5299289 Chlamydomonas reinhardtii
Cre06.g282950 1.0kb downstream 1.0kb downstream 3839 true chromosome_6: 5299290-5303128 Chlamydomonas reinhardtii
Cre06.g282950 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 5302129-5303128 Chlamydomonas reinhardtii
Cre06.g282950 2.0kb upstream 2.0kb upstream 4839 true chromosome_6: 5297290-5302128 Chlamydomonas reinhardtii
Cre06.g282950 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 5297290-5299289 Chlamydomonas reinhardtii
Cre06.g282950 2.0kb downstream 2.0kb downstream 4839 true chromosome_6: 5299290-5304128 Chlamydomonas reinhardtii
Cre06.g282950 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 5302129-5304128 Chlamydomonas reinhardtii
Cre06.g282950 5.0kb upstream 5.0kb upstream 7839 true chromosome_6: 5294290-5302128 Chlamydomonas reinhardtii
Cre06.g282950 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 5294290-5299289 Chlamydomonas reinhardtii
Cre06.g282950 5.0kb downstream 5.0kb downstream 7839 true chromosome_6: 5299290-5307128 Chlamydomonas reinhardtii
Cre06.g282950 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 5302129-5307128 Chlamydomonas reinhardtii
Cre06.g282950 10.0kb upstream 10.0kb upstream 12839 true chromosome_6: 5289290-5302128 Chlamydomonas reinhardtii
Cre06.g282950 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 5289290-5299289 Chlamydomonas reinhardtii
Cre06.g282950 10.0kb downstream 10.0kb downstream 12839 true chromosome_6: 5299290-5312128 Chlamydomonas reinhardtii
Cre06.g282950 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 5302129-5312128 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124097835 5260 Chlorophyte View MSA
123423833 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.467       High
cufflinks 4.491        
cufflinks 3.43        
cufflinks 2.926        
cufflinks 3.636        
cufflinks 3.602        
cufflinks 3.246        
cufflinks 3.423        
cufflinks 6.009       High
cufflinks 2.835       Low
cufflinks 2.023       Low
cufflinks 3.305        
cufflinks 3.45        
cufflinks 4.311        
cufflinks 3.272        
cufflinks 5.54       High
cufflinks 4.671        
cufflinks 3.474        
cufflinks 3.155        
cufflinks 3.906        
cufflinks 2.967        
cufflinks 4.712        
cufflinks 3.11        
cufflinks 3.019        
cufflinks 4.463        
cufflinks 13.1623 2.23625 24.0883   Low
cufflinks 26.2133 6.52458 45.902    
cufflinks 13.4731 0.0 28.1615    
cufflinks 10.952 1.80596 20.098    
cufflinks 17.664 3.44654 31.8814    

0 Strain