Gene : SNF7 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g282200 Defline:  (1 of 1) K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32)
Genomic Order:  950 Name:  ? Cre06.g282200
Secondary Identifier:  ? PAC:30780163
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g282200 0.5kb upstream 0.5kb upstream 2390 true chromosome_6: 5232646-5235035 Chlamydomonas reinhardtii
Cre06.g282200 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 5232646-5233145 Chlamydomonas reinhardtii
Cre06.g282200 0.5kb downstream 0.5kb downstream 2390 true chromosome_6: 5233146-5235535 Chlamydomonas reinhardtii
Cre06.g282200 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 5235036-5235535 Chlamydomonas reinhardtii
Cre06.g282200 1.0kb upstream 1.0kb upstream 2890 true chromosome_6: 5232146-5235035 Chlamydomonas reinhardtii
Cre06.g282200 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 5232146-5233145 Chlamydomonas reinhardtii
Cre06.g282200 1.0kb downstream 1.0kb downstream 2890 true chromosome_6: 5233146-5236035 Chlamydomonas reinhardtii
Cre06.g282200 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 5235036-5236035 Chlamydomonas reinhardtii
Cre06.g282200 2.0kb upstream 2.0kb upstream 3890 true chromosome_6: 5231146-5235035 Chlamydomonas reinhardtii
Cre06.g282200 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 5231146-5233145 Chlamydomonas reinhardtii
Cre06.g282200 2.0kb downstream 2.0kb downstream 3890 true chromosome_6: 5233146-5237035 Chlamydomonas reinhardtii
Cre06.g282200 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 5235036-5237035 Chlamydomonas reinhardtii
Cre06.g282200 5.0kb upstream 5.0kb upstream 6890 true chromosome_6: 5228146-5235035 Chlamydomonas reinhardtii
Cre06.g282200 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 5228146-5233145 Chlamydomonas reinhardtii
Cre06.g282200 5.0kb downstream 5.0kb downstream 6890 true chromosome_6: 5233146-5240035 Chlamydomonas reinhardtii
Cre06.g282200 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 5235036-5240035 Chlamydomonas reinhardtii
Cre06.g282200 10.0kb upstream 10.0kb upstream 11890 true chromosome_6: 5223146-5235035 Chlamydomonas reinhardtii
Cre06.g282200 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 5223146-5233145 Chlamydomonas reinhardtii
Cre06.g282200 10.0kb downstream 10.0kb downstream 11890 true chromosome_6: 5233146-5245035 Chlamydomonas reinhardtii
Cre06.g282200 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 5235036-5245035 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109164 5260 Chlorophyte View MSA
123426511 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.851     High  
cufflinks 44.859     High  
cufflinks 56.848     High  
cufflinks 60.255     High  
cufflinks 53.453     High  
cufflinks 40.542     High  
cufflinks 57.387     High  
cufflinks 51.238     High  
cufflinks 40.299     High  
cufflinks 51.876     High  
cufflinks 40.321     High  
cufflinks 47.95     High  
cufflinks 36.62     High  
cufflinks 48.366     High  
cufflinks 37.861     High  
cufflinks 46.482     High  
cufflinks 53.423     High  
cufflinks 93.523     High High
cufflinks 12.452     High Low
cufflinks 42.874     High  
cufflinks 41.08     High  
cufflinks 40.534     High  
cufflinks 38.271     High  
cufflinks 48.387     High  
cufflinks 44.693     High  
cufflinks 83.7679 0.0 171.413 High High
cufflinks 32.5271 8.09749 56.9568 High  
cufflinks 31.4368 0.0 63.9208 High Low
cufflinks 21.1622 1.3588 40.9656    
cufflinks 34.6129 5.02605 64.1997 High  

0 Strain