Gene : RPS5 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g290950 Defline:  (1 of 1) K02989 - small subunit ribosomal protein S5e (RP-S5e, RPS5)
Genomic Order:  1131 Name:  ? Cre06.g290950
Secondary Identifier:  ? PAC:30779633
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g290950 0.5kb upstream 0.5kb upstream 4292 true chromosome_6: 6247612-6251903 Chlamydomonas reinhardtii
Cre06.g290950 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 6247612-6248111 Chlamydomonas reinhardtii
Cre06.g290950 0.5kb downstream 0.5kb downstream 4292 true chromosome_6: 6248112-6252403 Chlamydomonas reinhardtii
Cre06.g290950 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 6251904-6252403 Chlamydomonas reinhardtii
Cre06.g290950 1.0kb upstream 1.0kb upstream 4792 true chromosome_6: 6247112-6251903 Chlamydomonas reinhardtii
Cre06.g290950 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 6247112-6248111 Chlamydomonas reinhardtii
Cre06.g290950 1.0kb downstream 1.0kb downstream 4792 true chromosome_6: 6248112-6252903 Chlamydomonas reinhardtii
Cre06.g290950 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 6251904-6252903 Chlamydomonas reinhardtii
Cre06.g290950 2.0kb upstream 2.0kb upstream 5792 true chromosome_6: 6246112-6251903 Chlamydomonas reinhardtii
Cre06.g290950 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 6246112-6248111 Chlamydomonas reinhardtii
Cre06.g290950 2.0kb downstream 2.0kb downstream 5792 true chromosome_6: 6248112-6253903 Chlamydomonas reinhardtii
Cre06.g290950 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 6251904-6253903 Chlamydomonas reinhardtii
Cre06.g290950 5.0kb upstream 5.0kb upstream 8792 true chromosome_6: 6243112-6251903 Chlamydomonas reinhardtii
Cre06.g290950 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 6243112-6248111 Chlamydomonas reinhardtii
Cre06.g290950 5.0kb downstream 5.0kb downstream 8792 true chromosome_6: 6248112-6256903 Chlamydomonas reinhardtii
Cre06.g290950 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 6251904-6256903 Chlamydomonas reinhardtii
Cre06.g290950 10.0kb upstream 10.0kb upstream 13792 true chromosome_6: 6238112-6251903 Chlamydomonas reinhardtii
Cre06.g290950 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 6238112-6248111 Chlamydomonas reinhardtii
Cre06.g290950 10.0kb downstream 10.0kb downstream 13792 true chromosome_6: 6248112-6261903 Chlamydomonas reinhardtii
Cre06.g290950 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 6251904-6261903 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109404 5260 Chlorophyte View MSA
123423957 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1203.73     High  
cufflinks 713.59     High Low
cufflinks 807.085     High  
cufflinks 676.097     High Low
cufflinks 805.708     High  
cufflinks 850.204     High  
cufflinks 1097.45     High  
cufflinks 791.091     High  
cufflinks 993.111     High  
cufflinks 1679.61     High High
cufflinks 757.716     High  
cufflinks 870.697     High  
cufflinks 1298.5     High  
cufflinks 827.891     High  
cufflinks 965.158     High  
cufflinks 899.506     High  
cufflinks 1074.03     High  
cufflinks 770.757     High  
cufflinks 2999.65     High High
cufflinks 1782.8     High High
cufflinks 1028.47     High  
cufflinks 1047.92     High  
cufflinks 1436.23     High High
cufflinks 969.247     High  
cufflinks 891.563     High  
cufflinks 4977.16 1899.87 8054.45 High High
cufflinks 907.136 96.8243 1717.45 High  
cufflinks 1534.24 0.0 3276.82 High Low
cufflinks 2960.6 811.514 5109.68 High  
cufflinks 2570.04 174.017 4966.06 High  

0 Strain