Gene : AGT1 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g294650 Defline:  (1 of 2) K00830 - alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase (AGXT)
Genomic Order:  1206 Name:  ? Cre06.g294650
Secondary Identifier:  ? PAC:30778561
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLYSYN-ALA-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g294650 0.5kb upstream 0.5kb upstream 5796 true chromosome_6: 6747951-6753746 Chlamydomonas reinhardtii
Cre06.g294650 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 6753247-6753746 Chlamydomonas reinhardtii
Cre06.g294650 0.5kb downstream 0.5kb downstream 5796 true chromosome_6: 6747451-6753246 Chlamydomonas reinhardtii
Cre06.g294650 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 6747451-6747950 Chlamydomonas reinhardtii
Cre06.g294650 1.0kb upstream 1.0kb upstream 6296 true chromosome_6: 6747951-6754246 Chlamydomonas reinhardtii
Cre06.g294650 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 6753247-6754246 Chlamydomonas reinhardtii
Cre06.g294650 1.0kb downstream 1.0kb downstream 6296 true chromosome_6: 6746951-6753246 Chlamydomonas reinhardtii
Cre06.g294650 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 6746951-6747950 Chlamydomonas reinhardtii
Cre06.g294650 2.0kb upstream 2.0kb upstream 7296 true chromosome_6: 6747951-6755246 Chlamydomonas reinhardtii
Cre06.g294650 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 6753247-6755246 Chlamydomonas reinhardtii
Cre06.g294650 2.0kb downstream 2.0kb downstream 7296 true chromosome_6: 6745951-6753246 Chlamydomonas reinhardtii
Cre06.g294650 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 6745951-6747950 Chlamydomonas reinhardtii
Cre06.g294650 5.0kb upstream 5.0kb upstream 10296 true chromosome_6: 6747951-6758246 Chlamydomonas reinhardtii
Cre06.g294650 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 6753247-6758246 Chlamydomonas reinhardtii
Cre06.g294650 5.0kb downstream 5.0kb downstream 10296 true chromosome_6: 6742951-6753246 Chlamydomonas reinhardtii
Cre06.g294650 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 6742951-6747950 Chlamydomonas reinhardtii
Cre06.g294650 10.0kb upstream 10.0kb upstream 15296 true chromosome_6: 6747951-6763246 Chlamydomonas reinhardtii
Cre06.g294650 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 6753247-6763246 Chlamydomonas reinhardtii
Cre06.g294650 10.0kb downstream 10.0kb downstream 15296 true chromosome_6: 6737951-6753246 Chlamydomonas reinhardtii
Cre06.g294650 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 6737951-6747950 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112827 5260 Chlorophyte View MSA
123427199 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 74.803     High  
cufflinks 49.949     High  
cufflinks 31.24     High Low
cufflinks 37.123     High  
cufflinks 53.332     High  
cufflinks 51.799     High  
cufflinks 35.274     High  
cufflinks 39.563     High  
cufflinks 72.923     High  
cufflinks 26.807     High Low
cufflinks 26.161     High Low
cufflinks 63.79     High  
cufflinks 22.705     High Low
cufflinks 53.729     High  
cufflinks 56.658     High  
cufflinks 74.519     High  
cufflinks 115.673     High High
cufflinks 45.784     High  
cufflinks 75.676     High  
cufflinks 144.585     High High
cufflinks 72.249     High  
cufflinks 90.861     High High
cufflinks 67.902     High  
cufflinks 29.733     High Low
cufflinks 114.835     High High
cufflinks 129.818 0.0 266.357 High High
cufflinks 198.936 30.0948 367.778 High  
cufflinks 101.377 0.0 211.79 High  
cufflinks 137.689 0.0 282.395 High High
cufflinks 73.6487 4.66587 142.632 High Low

0 Strain