Gene : Cre06.g294200 C. reinhardtii v5.6
Defline:  (1 of 1) 6.5.1.2 - DNA ligase (NAD(+)) / Polynucleotide ligase (NAD+) Genomic Order:  1197
Name:  ? Cre06.g294200 Secondary Identifier:  ? PAC:30779211
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g294200 0.5kb upstream 0.5kb upstream 7459 true chromosome_6: 6669202-6676660 Chlamydomonas reinhardtii
Cre06.g294200 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 6676161-6676660 Chlamydomonas reinhardtii
Cre06.g294200 0.5kb downstream 0.5kb downstream 7459 true chromosome_6: 6668702-6676160 Chlamydomonas reinhardtii
Cre06.g294200 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 6668702-6669201 Chlamydomonas reinhardtii
Cre06.g294200 1.0kb upstream 1.0kb upstream 7959 true chromosome_6: 6669202-6677160 Chlamydomonas reinhardtii
Cre06.g294200 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 6676161-6677160 Chlamydomonas reinhardtii
Cre06.g294200 1.0kb downstream 1.0kb downstream 7959 true chromosome_6: 6668202-6676160 Chlamydomonas reinhardtii
Cre06.g294200 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 6668202-6669201 Chlamydomonas reinhardtii
Cre06.g294200 2.0kb upstream 2.0kb upstream 8959 true chromosome_6: 6669202-6678160 Chlamydomonas reinhardtii
Cre06.g294200 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 6676161-6678160 Chlamydomonas reinhardtii
Cre06.g294200 2.0kb downstream 2.0kb downstream 8959 true chromosome_6: 6667202-6676160 Chlamydomonas reinhardtii
Cre06.g294200 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 6667202-6669201 Chlamydomonas reinhardtii
Cre06.g294200 5.0kb upstream 5.0kb upstream 11959 true chromosome_6: 6669202-6681160 Chlamydomonas reinhardtii
Cre06.g294200 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 6676161-6681160 Chlamydomonas reinhardtii
Cre06.g294200 5.0kb downstream 5.0kb downstream 11959 true chromosome_6: 6664202-6676160 Chlamydomonas reinhardtii
Cre06.g294200 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 6664202-6669201 Chlamydomonas reinhardtii
Cre06.g294200 10.0kb upstream 10.0kb upstream 16959 true chromosome_6: 6669202-6686160 Chlamydomonas reinhardtii
Cre06.g294200 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 6676161-6686160 Chlamydomonas reinhardtii
Cre06.g294200 10.0kb downstream 10.0kb downstream 16959 true chromosome_6: 6659202-6676160 Chlamydomonas reinhardtii
Cre06.g294200 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 6659202-6669201 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109419 5260 Chlorophyte View MSA
123427413 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.076     Low Low
cufflinks 0.421        
cufflinks 0.682        
cufflinks 1.013        
cufflinks 0.442        
cufflinks 0.455        
cufflinks 0.858        
cufflinks 1.175       High
cufflinks 0.065     Low Low
cufflinks 0.197       Low
cufflinks 1.142        
cufflinks 0.724        
cufflinks 0.717        
cufflinks 0.46        
cufflinks 0.481        
cufflinks 0.121     Low Low
cufflinks 0.854        
cufflinks 0.613        
cufflinks 0.158       Low
cufflinks 1.412       High
cufflinks 0.374        
cufflinks 0.269        
cufflinks 1.059        
cufflinks 1.782       High
cufflinks 0.468        
cufflinks 0.573116 0.0 1.18126   High
cufflinks 1.243 0.0 2.65522   Low
cufflinks 12.0327 0.0 24.1803    
cufflinks 1.76135 0.167676 3.35502   High
cufflinks 2.43043 0.209797 4.65107   Low

0 Strain