Gene : RFS1 C. reinhardtii v5.6
Primary Identifier:  ? Cre06.g296600 Defline:  (1 of 1) 2.5.1.9 - Riboflavin synthase
Genomic Order:  1245 Name:  ? Cre06.g296600
Secondary Identifier:  ? PAC:30779263
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii RIBOSYN2-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g296600 0.5kb upstream 0.5kb upstream 1867 true chromosome_6: 6995530-6997396 Chlamydomonas reinhardtii
Cre06.g296600 0.5kb upstream 0.5kb upstream 500 false chromosome_6: 6996897-6997396 Chlamydomonas reinhardtii
Cre06.g296600 0.5kb downstream 0.5kb downstream 1867 true chromosome_6: 6995030-6996896 Chlamydomonas reinhardtii
Cre06.g296600 0.5kb downstream 0.5kb downstream 500 false chromosome_6: 6995030-6995529 Chlamydomonas reinhardtii
Cre06.g296600 1.0kb upstream 1.0kb upstream 2367 true chromosome_6: 6995530-6997896 Chlamydomonas reinhardtii
Cre06.g296600 1.0kb upstream 1.0kb upstream 1000 false chromosome_6: 6996897-6997896 Chlamydomonas reinhardtii
Cre06.g296600 1.0kb downstream 1.0kb downstream 2367 true chromosome_6: 6994530-6996896 Chlamydomonas reinhardtii
Cre06.g296600 1.0kb downstream 1.0kb downstream 1000 false chromosome_6: 6994530-6995529 Chlamydomonas reinhardtii
Cre06.g296600 2.0kb upstream 2.0kb upstream 3367 true chromosome_6: 6995530-6998896 Chlamydomonas reinhardtii
Cre06.g296600 2.0kb upstream 2.0kb upstream 2000 false chromosome_6: 6996897-6998896 Chlamydomonas reinhardtii
Cre06.g296600 2.0kb downstream 2.0kb downstream 3367 true chromosome_6: 6993530-6996896 Chlamydomonas reinhardtii
Cre06.g296600 2.0kb downstream 2.0kb downstream 2000 false chromosome_6: 6993530-6995529 Chlamydomonas reinhardtii
Cre06.g296600 5.0kb upstream 5.0kb upstream 6367 true chromosome_6: 6995530-7001896 Chlamydomonas reinhardtii
Cre06.g296600 5.0kb upstream 5.0kb upstream 5000 false chromosome_6: 6996897-7001896 Chlamydomonas reinhardtii
Cre06.g296600 5.0kb downstream 5.0kb downstream 6367 true chromosome_6: 6990530-6996896 Chlamydomonas reinhardtii
Cre06.g296600 5.0kb downstream 5.0kb downstream 5000 false chromosome_6: 6990530-6995529 Chlamydomonas reinhardtii
Cre06.g296600 10.0kb upstream 10.0kb upstream 11367 true chromosome_6: 6995530-7006896 Chlamydomonas reinhardtii
Cre06.g296600 10.0kb upstream 10.0kb upstream 10000 false chromosome_6: 6996897-7006896 Chlamydomonas reinhardtii
Cre06.g296600 10.0kb downstream 10.0kb downstream 11367 true chromosome_6: 6985530-6996896 Chlamydomonas reinhardtii
Cre06.g296600 10.0kb downstream 10.0kb downstream 10000 false chromosome_6: 6985530-6995529 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110521 5260 Chlorophyte View MSA
123423798 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.022     High  
cufflinks 68.693     High High
cufflinks 49.833     High  
cufflinks 34.825     High  
cufflinks 34.415     High  
cufflinks 51.682     High  
cufflinks 49.804     High  
cufflinks 16.221     High Low
cufflinks 31.303     High  
cufflinks 76.219     High High
cufflinks 46.986     High  
cufflinks 31.048     High  
cufflinks 32.148     High  
cufflinks 43.336     High  
cufflinks 57.127     High  
cufflinks 30.219     High  
cufflinks 80.951     High High
cufflinks 50.929     High  
cufflinks 45.583     High  
cufflinks 14.733     High Low
cufflinks 27.214     High  
cufflinks 48.373     High  
cufflinks 27.406     High  
cufflinks 39.047     High  
cufflinks 52.047     High  
cufflinks 49.3304 0.822369 97.8384 High Low
cufflinks 36.2227 9.4011 63.0444 High  
cufflinks 26.3482 0.0 53.0617    
cufflinks 32.9298 1.90773 63.9519 High Low
cufflinks 50.9664 6.82902 95.1038 High High

0 Strain