Gene : MSC1 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g329300 Defline:  (1 of 1) PTHR30221 - SMALL-CONDUCTANCE MECHANOSENSITIVE CHANNEL
Genomic Order:  430 Name:  ? Cre07.g329300
Secondary Identifier:  ? PAC:30774768
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g329300 0.5kb upstream 0.5kb upstream 7567 true chromosome_7: 2478509-2486075 Chlamydomonas reinhardtii
Cre07.g329300 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 2478509-2479008 Chlamydomonas reinhardtii
Cre07.g329300 0.5kb downstream 0.5kb downstream 7567 true chromosome_7: 2479009-2486575 Chlamydomonas reinhardtii
Cre07.g329300 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 2486076-2486575 Chlamydomonas reinhardtii
Cre07.g329300 1.0kb upstream 1.0kb upstream 8067 true chromosome_7: 2478009-2486075 Chlamydomonas reinhardtii
Cre07.g329300 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 2478009-2479008 Chlamydomonas reinhardtii
Cre07.g329300 1.0kb downstream 1.0kb downstream 8067 true chromosome_7: 2479009-2487075 Chlamydomonas reinhardtii
Cre07.g329300 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 2486076-2487075 Chlamydomonas reinhardtii
Cre07.g329300 2.0kb upstream 2.0kb upstream 9067 true chromosome_7: 2477009-2486075 Chlamydomonas reinhardtii
Cre07.g329300 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 2477009-2479008 Chlamydomonas reinhardtii
Cre07.g329300 2.0kb downstream 2.0kb downstream 9067 true chromosome_7: 2479009-2488075 Chlamydomonas reinhardtii
Cre07.g329300 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 2486076-2488075 Chlamydomonas reinhardtii
Cre07.g329300 5.0kb upstream 5.0kb upstream 12067 true chromosome_7: 2474009-2486075 Chlamydomonas reinhardtii
Cre07.g329300 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 2474009-2479008 Chlamydomonas reinhardtii
Cre07.g329300 5.0kb downstream 5.0kb downstream 12067 true chromosome_7: 2479009-2491075 Chlamydomonas reinhardtii
Cre07.g329300 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 2486076-2491075 Chlamydomonas reinhardtii
Cre07.g329300 10.0kb upstream 10.0kb upstream 17067 true chromosome_7: 2469009-2486075 Chlamydomonas reinhardtii
Cre07.g329300 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 2469009-2479008 Chlamydomonas reinhardtii
Cre07.g329300 10.0kb downstream 10.0kb downstream 17067 true chromosome_7: 2479009-2496075 Chlamydomonas reinhardtii
Cre07.g329300 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 2486076-2496075 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098460 5260 Chlorophyte View MSA
123427972 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.177        
cufflinks 1.31        
cufflinks 0.97        
cufflinks 1.692        
cufflinks 1.454        
cufflinks 1.202        
cufflinks 1.573        
cufflinks 3.243       High
cufflinks 0.979        
cufflinks 0.478       Low
cufflinks 1.074        
cufflinks 2.187       High
cufflinks 1.17        
cufflinks 1.138        
cufflinks 1.446        
cufflinks 1.289        
cufflinks 2.146       High
cufflinks 1.268        
cufflinks 0.511       Low
cufflinks 1.158        
cufflinks 1.784        
cufflinks 1.832        
cufflinks 1.092        
cufflinks 2.235       High
cufflinks 2.03        
cufflinks 1.57836 0.106858 3.04986    
cufflinks 4.17366 0.722671 7.62465    
cufflinks 4.49504 0.0 9.32006    
cufflinks 1.8404 0.161729 3.51907    
cufflinks 2.9409 0.352963 5.52884   Low

0 Strain