Gene : PSL1 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g332550 Defline:  (1 of 1) PTHR12174:SF23 - MINOR HISTOCOMPATIBILITY ANTIGEN H13
Genomic Order:  505 Name:  ? Cre07.g332550
Secondary Identifier:  ? PAC:30774501
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g332550 0.5kb upstream 0.5kb upstream 3242 true chromosome_7: 2897796-2901037 Chlamydomonas reinhardtii
Cre07.g332550 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 2900538-2901037 Chlamydomonas reinhardtii
Cre07.g332550 0.5kb downstream 0.5kb downstream 3242 true chromosome_7: 2897296-2900537 Chlamydomonas reinhardtii
Cre07.g332550 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 2897296-2897795 Chlamydomonas reinhardtii
Cre07.g332550 1.0kb upstream 1.0kb upstream 3742 true chromosome_7: 2897796-2901537 Chlamydomonas reinhardtii
Cre07.g332550 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 2900538-2901537 Chlamydomonas reinhardtii
Cre07.g332550 1.0kb downstream 1.0kb downstream 3742 true chromosome_7: 2896796-2900537 Chlamydomonas reinhardtii
Cre07.g332550 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 2896796-2897795 Chlamydomonas reinhardtii
Cre07.g332550 2.0kb upstream 2.0kb upstream 4742 true chromosome_7: 2897796-2902537 Chlamydomonas reinhardtii
Cre07.g332550 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 2900538-2902537 Chlamydomonas reinhardtii
Cre07.g332550 2.0kb downstream 2.0kb downstream 4742 true chromosome_7: 2895796-2900537 Chlamydomonas reinhardtii
Cre07.g332550 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 2895796-2897795 Chlamydomonas reinhardtii
Cre07.g332550 5.0kb upstream 5.0kb upstream 7742 true chromosome_7: 2897796-2905537 Chlamydomonas reinhardtii
Cre07.g332550 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 2900538-2905537 Chlamydomonas reinhardtii
Cre07.g332550 5.0kb downstream 5.0kb downstream 7742 true chromosome_7: 2892796-2900537 Chlamydomonas reinhardtii
Cre07.g332550 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 2892796-2897795 Chlamydomonas reinhardtii
Cre07.g332550 10.0kb upstream 10.0kb upstream 12742 true chromosome_7: 2897796-2910537 Chlamydomonas reinhardtii
Cre07.g332550 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 2900538-2910537 Chlamydomonas reinhardtii
Cre07.g332550 10.0kb downstream 10.0kb downstream 12742 true chromosome_7: 2887796-2900537 Chlamydomonas reinhardtii
Cre07.g332550 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 2887796-2897795 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112694 5260 Chlorophyte View MSA
123428175 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.571     High  
cufflinks 14.502     High  
cufflinks 9.324        
cufflinks 7.005        
cufflinks 12.789        
cufflinks 15.378     High  
cufflinks 21.271     High High
cufflinks 14.101        
cufflinks 7.45        
cufflinks 8.01     High  
cufflinks 4.077       Low
cufflinks 12.648        
cufflinks 16.608     High High
cufflinks 13.353     High  
cufflinks 7.651        
cufflinks 11.722        
cufflinks 4.55       Low
cufflinks 8.113        
cufflinks 8.893     High  
cufflinks 10.996        
cufflinks 8.541        
cufflinks 3.1       Low
cufflinks 15.66     High High
cufflinks 10.91        
cufflinks 3.635       Low
cufflinks 15.6243 1.91508 29.3335   Low
cufflinks 12.1193 3.06457 21.174    
cufflinks 7.74125 0.0 15.8817   Low
cufflinks 9.76753 1.57723 17.9578   Low
cufflinks 16.2285 3.24001 29.217   High

0 Strain