Gene : Cre07.g335100 C. reinhardtii v5.6
Defline:  (1 of 7) PF07883 - Cupin domain (Cupin_2) Genomic Order:  558
Name:  ? Cre07.g335100 Secondary Identifier:  ? PAC:30775111
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g335100 0.5kb upstream 0.5kb upstream 3510 true chromosome_7: 3385117-3388626 Chlamydomonas reinhardtii
Cre07.g335100 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 3385117-3385616 Chlamydomonas reinhardtii
Cre07.g335100 0.5kb downstream 0.5kb downstream 3510 true chromosome_7: 3385617-3389126 Chlamydomonas reinhardtii
Cre07.g335100 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 3388627-3389126 Chlamydomonas reinhardtii
Cre07.g335100 1.0kb upstream 1.0kb upstream 4010 true chromosome_7: 3384617-3388626 Chlamydomonas reinhardtii
Cre07.g335100 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 3384617-3385616 Chlamydomonas reinhardtii
Cre07.g335100 1.0kb downstream 1.0kb downstream 4010 true chromosome_7: 3385617-3389626 Chlamydomonas reinhardtii
Cre07.g335100 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 3388627-3389626 Chlamydomonas reinhardtii
Cre07.g335100 2.0kb upstream 2.0kb upstream 5010 true chromosome_7: 3383617-3388626 Chlamydomonas reinhardtii
Cre07.g335100 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 3383617-3385616 Chlamydomonas reinhardtii
Cre07.g335100 2.0kb downstream 2.0kb downstream 5010 true chromosome_7: 3385617-3390626 Chlamydomonas reinhardtii
Cre07.g335100 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 3388627-3390626 Chlamydomonas reinhardtii
Cre07.g335100 5.0kb upstream 5.0kb upstream 8010 true chromosome_7: 3380617-3388626 Chlamydomonas reinhardtii
Cre07.g335100 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 3380617-3385616 Chlamydomonas reinhardtii
Cre07.g335100 5.0kb downstream 5.0kb downstream 8010 true chromosome_7: 3385617-3393626 Chlamydomonas reinhardtii
Cre07.g335100 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 3388627-3393626 Chlamydomonas reinhardtii
Cre07.g335100 10.0kb upstream 10.0kb upstream 13010 true chromosome_7: 3375617-3388626 Chlamydomonas reinhardtii
Cre07.g335100 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 3375617-3385616 Chlamydomonas reinhardtii
Cre07.g335100 10.0kb downstream 10.0kb downstream 13010 true chromosome_7: 3385617-3398626 Chlamydomonas reinhardtii
Cre07.g335100 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 3388627-3398626 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081775 5260 Chlorophyte View MSA
123426893 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.184        
cufflinks 0.1     Low  
cufflinks 0.882       High
cufflinks 0.499        
cufflinks 0.065     Low  
cufflinks 0.732       High
cufflinks 0.026     Low Low
cufflinks 0.588        
cufflinks 0.3        
cufflinks 0.476        
cufflinks 0.363        
cufflinks 0.084     Low  
cufflinks 0.445        
cufflinks 0.056     Low  
cufflinks 0.185        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.81       High
cufflinks 0.166        
cufflinks 0.004     Low Low
cufflinks 0.131     Low  
cufflinks 0.063     Low  
cufflinks 0.088     Low  
cufflinks 0.396        
cufflinks 0.056     Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.39303 0.0 3.39733   High
cufflinks 0.421092 0.0 1.38289    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.6387 1.75112 19.5263   High

0 Strain