Gene : Cre07.g338400 C. reinhardtii v5.6
Defline:  (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) Genomic Order:  628
Name:  ? Cre07.g338400 Secondary Identifier:  ? PAC:30775382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g338400 0.5kb upstream 0.5kb upstream 4673 true chromosome_7: 3788279-3792951 Chlamydomonas reinhardtii
Cre07.g338400 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 3788279-3788778 Chlamydomonas reinhardtii
Cre07.g338400 0.5kb downstream 0.5kb downstream 4673 true chromosome_7: 3788779-3793451 Chlamydomonas reinhardtii
Cre07.g338400 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 3792952-3793451 Chlamydomonas reinhardtii
Cre07.g338400 1.0kb upstream 1.0kb upstream 5173 true chromosome_7: 3787779-3792951 Chlamydomonas reinhardtii
Cre07.g338400 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 3787779-3788778 Chlamydomonas reinhardtii
Cre07.g338400 1.0kb downstream 1.0kb downstream 5173 true chromosome_7: 3788779-3793951 Chlamydomonas reinhardtii
Cre07.g338400 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 3792952-3793951 Chlamydomonas reinhardtii
Cre07.g338400 2.0kb upstream 2.0kb upstream 6173 true chromosome_7: 3786779-3792951 Chlamydomonas reinhardtii
Cre07.g338400 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 3786779-3788778 Chlamydomonas reinhardtii
Cre07.g338400 2.0kb downstream 2.0kb downstream 6173 true chromosome_7: 3788779-3794951 Chlamydomonas reinhardtii
Cre07.g338400 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 3792952-3794951 Chlamydomonas reinhardtii
Cre07.g338400 5.0kb upstream 5.0kb upstream 9173 true chromosome_7: 3783779-3792951 Chlamydomonas reinhardtii
Cre07.g338400 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 3783779-3788778 Chlamydomonas reinhardtii
Cre07.g338400 5.0kb downstream 5.0kb downstream 9173 true chromosome_7: 3788779-3797951 Chlamydomonas reinhardtii
Cre07.g338400 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 3792952-3797951 Chlamydomonas reinhardtii
Cre07.g338400 10.0kb upstream 10.0kb upstream 14173 true chromosome_7: 3778779-3792951 Chlamydomonas reinhardtii
Cre07.g338400 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 3778779-3788778 Chlamydomonas reinhardtii
Cre07.g338400 10.0kb downstream 10.0kb downstream 14173 true chromosome_7: 3788779-3802951 Chlamydomonas reinhardtii
Cre07.g338400 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 3792952-3802951 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108696 5260 Chlorophyte View MSA
123425887 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.705       Low
cufflinks 1.689        
cufflinks 1.619        
cufflinks 1.713        
cufflinks 1.256        
cufflinks 1.222        
cufflinks 1.456        
cufflinks 1.706        
cufflinks 1.372        
cufflinks 0.629       Low
cufflinks 1.566        
cufflinks 1.456        
cufflinks 0.681       Low
cufflinks 1.574        
cufflinks 1.04        
cufflinks 1.269        
cufflinks 1.342        
cufflinks 1.569        
cufflinks 0.701       Low
cufflinks 1.446        
cufflinks 1.416        
cufflinks 1.517        
cufflinks 1.419        
cufflinks 1.546        
cufflinks 1.551        
cufflinks 2.77011 0.261862 5.27836   Low
cufflinks 4.24867 0.70551 7.79182    
cufflinks 3.10241 0.0 6.79625    
cufflinks 3.11416 0.347609 5.8807   Low
cufflinks 2.62093 0.257325 4.98453    

0 Strain