Gene : Cre07.g312900 C. reinhardtii v5.6
Defline:  (1 of 1) K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Genomic Order:  20
Name:  ? Cre07.g312900 Secondary Identifier:  ? PAC:30774995
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7511 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g312900 0.5kb upstream 0.5kb upstream 10182 true chromosome_7: 102626-112807 Chlamydomonas reinhardtii
Cre07.g312900 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 102626-103125 Chlamydomonas reinhardtii
Cre07.g312900 0.5kb downstream 0.5kb downstream 10182 true chromosome_7: 103126-113307 Chlamydomonas reinhardtii
Cre07.g312900 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 112808-113307 Chlamydomonas reinhardtii
Cre07.g312900 1.0kb upstream 1.0kb upstream 10682 true chromosome_7: 102126-112807 Chlamydomonas reinhardtii
Cre07.g312900 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 102126-103125 Chlamydomonas reinhardtii
Cre07.g312900 1.0kb downstream 1.0kb downstream 10682 true chromosome_7: 103126-113807 Chlamydomonas reinhardtii
Cre07.g312900 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 112808-113807 Chlamydomonas reinhardtii
Cre07.g312900 2.0kb upstream 2.0kb upstream 11682 true chromosome_7: 101126-112807 Chlamydomonas reinhardtii
Cre07.g312900 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 101126-103125 Chlamydomonas reinhardtii
Cre07.g312900 2.0kb downstream 2.0kb downstream 11682 true chromosome_7: 103126-114807 Chlamydomonas reinhardtii
Cre07.g312900 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 112808-114807 Chlamydomonas reinhardtii
Cre07.g312900 5.0kb upstream 5.0kb upstream 14682 true chromosome_7: 98126-112807 Chlamydomonas reinhardtii
Cre07.g312900 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 98126-103125 Chlamydomonas reinhardtii
Cre07.g312900 5.0kb downstream 5.0kb downstream 14682 true chromosome_7: 103126-117807 Chlamydomonas reinhardtii
Cre07.g312900 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 112808-117807 Chlamydomonas reinhardtii
Cre07.g312900 10.0kb upstream 10.0kb upstream 19682 true chromosome_7: 93126-112807 Chlamydomonas reinhardtii
Cre07.g312900 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 93126-103125 Chlamydomonas reinhardtii
Cre07.g312900 10.0kb downstream 10.0kb downstream 19682 true chromosome_7: 103126-122807 Chlamydomonas reinhardtii
Cre07.g312900 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 112808-122807 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109838 5260 Chlorophyte View MSA
123428406 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.774       Low
cufflinks 3.768        
cufflinks 4.227        
cufflinks 4.006        
cufflinks 3.34        
cufflinks 2.646        
cufflinks 3.973        
cufflinks 4.27        
cufflinks 2.179       Low
cufflinks 1.475       Low
cufflinks 4.658       High
cufflinks 4.22        
cufflinks 2.29        
cufflinks 3.04        
cufflinks 3.297        
cufflinks 2.419        
cufflinks 3.973        
cufflinks 3.369        
cufflinks 1.267       Low
cufflinks 5.284       High
cufflinks 3.554        
cufflinks 3.316        
cufflinks 3.425        
cufflinks 4.293        
cufflinks 3.483        
cufflinks 14.0664 0.0728387 28.0599    
cufflinks 15.242 3.79799 26.6859   High
cufflinks 12.7347 0.0 25.8373    
cufflinks 11.1017 0.349418 21.854    
cufflinks 12.2226 1.69672 22.7485    

0 Strain