Gene : Cre07.g313850 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR22844//PTHR22844:SF219 - F-BOX AND WD40 DOMAIN PROTEIN // WD REPEAT-CONTAINING PROTEIN 49 Genomic Order:  42
Name:  ? Cre07.g313850 Secondary Identifier:  ? PAC:30774883
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g313850 0.5kb upstream 0.5kb upstream 12179 true chromosome_7: 238229-250407 Chlamydomonas reinhardtii
Cre07.g313850 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 249908-250407 Chlamydomonas reinhardtii
Cre07.g313850 0.5kb downstream 0.5kb downstream 12179 true chromosome_7: 237729-249907 Chlamydomonas reinhardtii
Cre07.g313850 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 237729-238228 Chlamydomonas reinhardtii
Cre07.g313850 1.0kb upstream 1.0kb upstream 12679 true chromosome_7: 238229-250907 Chlamydomonas reinhardtii
Cre07.g313850 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 249908-250907 Chlamydomonas reinhardtii
Cre07.g313850 1.0kb downstream 1.0kb downstream 12679 true chromosome_7: 237229-249907 Chlamydomonas reinhardtii
Cre07.g313850 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 237229-238228 Chlamydomonas reinhardtii
Cre07.g313850 2.0kb upstream 2.0kb upstream 13679 true chromosome_7: 238229-251907 Chlamydomonas reinhardtii
Cre07.g313850 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 249908-251907 Chlamydomonas reinhardtii
Cre07.g313850 2.0kb downstream 2.0kb downstream 13679 true chromosome_7: 236229-249907 Chlamydomonas reinhardtii
Cre07.g313850 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 236229-238228 Chlamydomonas reinhardtii
Cre07.g313850 5.0kb upstream 5.0kb upstream 16679 true chromosome_7: 238229-254907 Chlamydomonas reinhardtii
Cre07.g313850 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 249908-254907 Chlamydomonas reinhardtii
Cre07.g313850 5.0kb downstream 5.0kb downstream 16679 true chromosome_7: 233229-249907 Chlamydomonas reinhardtii
Cre07.g313850 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 233229-238228 Chlamydomonas reinhardtii
Cre07.g313850 10.0kb upstream 10.0kb upstream 21679 true chromosome_7: 238229-259907 Chlamydomonas reinhardtii
Cre07.g313850 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 249908-259907 Chlamydomonas reinhardtii
Cre07.g313850 10.0kb downstream 10.0kb downstream 21679 true chromosome_7: 228229-249907 Chlamydomonas reinhardtii
Cre07.g313850 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 228229-238228 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112628 5260 Chlorophyte View MSA
123427190 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.081       Low
cufflinks 0.753        
cufflinks 0.799        
cufflinks 1.047        
cufflinks 0.5        
cufflinks 0.466        
cufflinks 0.953        
cufflinks 0.886        
cufflinks 0.067     Low Low
cufflinks 0.162       Low
cufflinks 1.179       High
cufflinks 0.829        
cufflinks 0.188       Low
cufflinks 0.493        
cufflinks 0.721        
cufflinks 0.199       Low
cufflinks 0.455        
cufflinks 0.606        
cufflinks 0.237        
cufflinks 1.305       High
cufflinks 0.815        
cufflinks 0.257        
cufflinks 0.854        
cufflinks 0.773        
cufflinks 0.368        
cufflinks 0.849611 0.0468998 1.65232   High
cufflinks 3.60588 0.808985 6.40278    
cufflinks 2.85402 0.0 5.92903    
cufflinks 2.29015 0.373443 4.20686   High
cufflinks 3.40121 0.651433 6.15098    

0 Strain