Gene : UBQ5 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g322100 Defline:  (1 of 1) PTHR12786//PTHR12786:SF1 - SPLICING FACTOR SF3A-RELATED // PROTEIN SDE2 HOMOLOG
Genomic Order:  219 Name:  ? Cre07.g322100
Secondary Identifier:  ? PAC:30774764
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g322100 0.5kb upstream 0.5kb upstream 2626 true chromosome_7: 1305856-1308481 Chlamydomonas reinhardtii
Cre07.g322100 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 1307982-1308481 Chlamydomonas reinhardtii
Cre07.g322100 0.5kb downstream 0.5kb downstream 2626 true chromosome_7: 1305356-1307981 Chlamydomonas reinhardtii
Cre07.g322100 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 1305356-1305855 Chlamydomonas reinhardtii
Cre07.g322100 1.0kb upstream 1.0kb upstream 3126 true chromosome_7: 1305856-1308981 Chlamydomonas reinhardtii
Cre07.g322100 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 1307982-1308981 Chlamydomonas reinhardtii
Cre07.g322100 1.0kb downstream 1.0kb downstream 3126 true chromosome_7: 1304856-1307981 Chlamydomonas reinhardtii
Cre07.g322100 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 1304856-1305855 Chlamydomonas reinhardtii
Cre07.g322100 2.0kb upstream 2.0kb upstream 4126 true chromosome_7: 1305856-1309981 Chlamydomonas reinhardtii
Cre07.g322100 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 1307982-1309981 Chlamydomonas reinhardtii
Cre07.g322100 2.0kb downstream 2.0kb downstream 4126 true chromosome_7: 1303856-1307981 Chlamydomonas reinhardtii
Cre07.g322100 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 1303856-1305855 Chlamydomonas reinhardtii
Cre07.g322100 5.0kb upstream 5.0kb upstream 7126 true chromosome_7: 1305856-1312981 Chlamydomonas reinhardtii
Cre07.g322100 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 1307982-1312981 Chlamydomonas reinhardtii
Cre07.g322100 5.0kb downstream 5.0kb downstream 7126 true chromosome_7: 1300856-1307981 Chlamydomonas reinhardtii
Cre07.g322100 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 1300856-1305855 Chlamydomonas reinhardtii
Cre07.g322100 10.0kb upstream 10.0kb upstream 12126 true chromosome_7: 1305856-1317981 Chlamydomonas reinhardtii
Cre07.g322100 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 1307982-1317981 Chlamydomonas reinhardtii
Cre07.g322100 10.0kb downstream 10.0kb downstream 12126 true chromosome_7: 1295856-1307981 Chlamydomonas reinhardtii
Cre07.g322100 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 1295856-1305855 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111246 5260 Chlorophyte View MSA
123427367 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.26       Low
cufflinks 12.633        
cufflinks 16.405     High  
cufflinks 16.319     High  
cufflinks 11.719        
cufflinks 11.087        
cufflinks 16.619     High  
cufflinks 15.399        
cufflinks 5.253       Low
cufflinks 7.633     High  
cufflinks 14.83     High  
cufflinks 14.107        
cufflinks 9.659        
cufflinks 13.401     High  
cufflinks 11.077        
cufflinks 7.451       Low
cufflinks 11.279        
cufflinks 15.075     High  
cufflinks 6.15     High Low
cufflinks 25.394     High High
cufflinks 11.839        
cufflinks 7.577        
cufflinks 14.139     High  
cufflinks 15.279        
cufflinks 7.217       Low
cufflinks 23.2712 1.72643 44.816   High
cufflinks 10.0707 2.60984 17.5315   Low
cufflinks 9.29554 0.0 18.8196    
cufflinks 11.1679 1.59986 20.736    
cufflinks 12.3991 2.49082 22.3074   Low

0 Strain