Gene : Cre08.g363500 C. reinhardtii v5.6
Defline:  (1 of 2) 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Genomic Order:  187
Name:  ? Cre08.g363500 Secondary Identifier:  ? PAC:30774133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5080 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5353 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6433 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6598 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6958 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7036 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7606 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7619 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g363500 0.5kb upstream 0.5kb upstream 4592 true chromosome_8: 1278549-1283140 Chlamydomonas reinhardtii
Cre08.g363500 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 1282641-1283140 Chlamydomonas reinhardtii
Cre08.g363500 0.5kb downstream 0.5kb downstream 4592 true chromosome_8: 1278049-1282640 Chlamydomonas reinhardtii
Cre08.g363500 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 1278049-1278548 Chlamydomonas reinhardtii
Cre08.g363500 1.0kb upstream 1.0kb upstream 5092 true chromosome_8: 1278549-1283640 Chlamydomonas reinhardtii
Cre08.g363500 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 1282641-1283640 Chlamydomonas reinhardtii
Cre08.g363500 1.0kb downstream 1.0kb downstream 5092 true chromosome_8: 1277549-1282640 Chlamydomonas reinhardtii
Cre08.g363500 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 1277549-1278548 Chlamydomonas reinhardtii
Cre08.g363500 2.0kb upstream 2.0kb upstream 6092 true chromosome_8: 1278549-1284640 Chlamydomonas reinhardtii
Cre08.g363500 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 1282641-1284640 Chlamydomonas reinhardtii
Cre08.g363500 2.0kb downstream 2.0kb downstream 6092 true chromosome_8: 1276549-1282640 Chlamydomonas reinhardtii
Cre08.g363500 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 1276549-1278548 Chlamydomonas reinhardtii
Cre08.g363500 5.0kb upstream 5.0kb upstream 9092 true chromosome_8: 1278549-1287640 Chlamydomonas reinhardtii
Cre08.g363500 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 1282641-1287640 Chlamydomonas reinhardtii
Cre08.g363500 5.0kb downstream 5.0kb downstream 9092 true chromosome_8: 1273549-1282640 Chlamydomonas reinhardtii
Cre08.g363500 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 1273549-1278548 Chlamydomonas reinhardtii
Cre08.g363500 10.0kb upstream 10.0kb upstream 14092 true chromosome_8: 1278549-1292640 Chlamydomonas reinhardtii
Cre08.g363500 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 1282641-1292640 Chlamydomonas reinhardtii
Cre08.g363500 10.0kb downstream 10.0kb downstream 14092 true chromosome_8: 1268549-1282640 Chlamydomonas reinhardtii
Cre08.g363500 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 1268549-1278548 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110437 5260 Chlorophyte View MSA
123425989 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.463     High High
cufflinks 5.899        
cufflinks 9.203        
cufflinks 10.236       High
cufflinks 5.556        
cufflinks 5.459        
cufflinks 4.208        
cufflinks 6.647        
cufflinks 12.453     High High
cufflinks 4.373        
cufflinks 6.521        
cufflinks 4.985        
cufflinks 3.726        
cufflinks 5.541        
cufflinks 5.815        
cufflinks 8.361        
cufflinks 8.437        
cufflinks 8.558        
cufflinks 0.984       Low
cufflinks 2.789       Low
cufflinks 6.557        
cufflinks 8.729        
cufflinks 1.785       Low
cufflinks 5.057        
cufflinks 10.178        
cufflinks 2.72237 0.241417 5.20332   Low
cufflinks 7.2482 1.64522 12.8512    
cufflinks 3.98902 0.0 8.57424    
cufflinks 4.78918 0.742463 8.8359    
cufflinks 8.74454 1.71132 15.7778    

0 Strain