Gene : VPS37 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g362550 Defline:  (1 of 1) K12185 - ESCRT-I complex subunit VPS37 (VPS37)
Genomic Order:  162 Name:  ? Cre08.g362550
Secondary Identifier:  ? PAC:30774115
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g362550 0.5kb upstream 0.5kb upstream 3666 true chromosome_8: 1117436-1121101 Chlamydomonas reinhardtii
Cre08.g362550 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 1117436-1117935 Chlamydomonas reinhardtii
Cre08.g362550 0.5kb downstream 0.5kb downstream 3666 true chromosome_8: 1117936-1121601 Chlamydomonas reinhardtii
Cre08.g362550 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 1121102-1121601 Chlamydomonas reinhardtii
Cre08.g362550 1.0kb upstream 1.0kb upstream 4166 true chromosome_8: 1116936-1121101 Chlamydomonas reinhardtii
Cre08.g362550 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 1116936-1117935 Chlamydomonas reinhardtii
Cre08.g362550 1.0kb downstream 1.0kb downstream 4166 true chromosome_8: 1117936-1122101 Chlamydomonas reinhardtii
Cre08.g362550 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 1121102-1122101 Chlamydomonas reinhardtii
Cre08.g362550 2.0kb upstream 2.0kb upstream 5166 true chromosome_8: 1115936-1121101 Chlamydomonas reinhardtii
Cre08.g362550 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 1115936-1117935 Chlamydomonas reinhardtii
Cre08.g362550 2.0kb downstream 2.0kb downstream 5166 true chromosome_8: 1117936-1123101 Chlamydomonas reinhardtii
Cre08.g362550 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 1121102-1123101 Chlamydomonas reinhardtii
Cre08.g362550 5.0kb upstream 5.0kb upstream 8166 true chromosome_8: 1112936-1121101 Chlamydomonas reinhardtii
Cre08.g362550 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 1112936-1117935 Chlamydomonas reinhardtii
Cre08.g362550 5.0kb downstream 5.0kb downstream 8166 true chromosome_8: 1117936-1126101 Chlamydomonas reinhardtii
Cre08.g362550 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 1121102-1126101 Chlamydomonas reinhardtii
Cre08.g362550 10.0kb upstream 10.0kb upstream 13166 true chromosome_8: 1107936-1121101 Chlamydomonas reinhardtii
Cre08.g362550 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 1107936-1117935 Chlamydomonas reinhardtii
Cre08.g362550 10.0kb downstream 10.0kb downstream 13166 true chromosome_8: 1117936-1131101 Chlamydomonas reinhardtii
Cre08.g362550 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 1121102-1131101 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112043 5260 Chlorophyte View MSA
123424411 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.167        
cufflinks 6.309        
cufflinks 6.979        
cufflinks 5.578        
cufflinks 6.897        
cufflinks 6.409        
cufflinks 6.14        
cufflinks 7.493        
cufflinks 4.71        
cufflinks 8.834     High High
cufflinks 3.091       Low
cufflinks 6.602        
cufflinks 9.314       High
cufflinks 6.88        
cufflinks 4.499        
cufflinks 4.972        
cufflinks 4.99        
cufflinks 9.42       High
cufflinks 2.528       Low
cufflinks 9.259       High
cufflinks 3.98       Low
cufflinks 4.334        
cufflinks 8.414       High
cufflinks 6.843        
cufflinks 4.228        
cufflinks 15.2329 1.71644 28.7494   High
cufflinks 4.02281 0.491351 7.55427    
cufflinks 7.22745 0.0 14.7776    
cufflinks 4.85975 0.767614 8.95189    
cufflinks 5.14456 0.750327 9.53879    

0 Strain