Gene : PIN3 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g350400 Defline:  (1 of 1) PTHR10657//PTHR10657:SF12 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED
Genomic Order:  902 Name:  ? Cre07.g350400
Secondary Identifier:  ? PAC:30775367
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g350400 0.5kb upstream 0.5kb upstream 2181 true chromosome_7: 5419983-5422163 Chlamydomonas reinhardtii
Cre07.g350400 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 5421664-5422163 Chlamydomonas reinhardtii
Cre07.g350400 0.5kb downstream 0.5kb downstream 2181 true chromosome_7: 5419483-5421663 Chlamydomonas reinhardtii
Cre07.g350400 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 5419483-5419982 Chlamydomonas reinhardtii
Cre07.g350400 1.0kb upstream 1.0kb upstream 2681 true chromosome_7: 5419983-5422663 Chlamydomonas reinhardtii
Cre07.g350400 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 5421664-5422663 Chlamydomonas reinhardtii
Cre07.g350400 1.0kb downstream 1.0kb downstream 2681 true chromosome_7: 5418983-5421663 Chlamydomonas reinhardtii
Cre07.g350400 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 5418983-5419982 Chlamydomonas reinhardtii
Cre07.g350400 2.0kb upstream 2.0kb upstream 3681 true chromosome_7: 5419983-5423663 Chlamydomonas reinhardtii
Cre07.g350400 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 5421664-5423663 Chlamydomonas reinhardtii
Cre07.g350400 2.0kb downstream 2.0kb downstream 3681 true chromosome_7: 5417983-5421663 Chlamydomonas reinhardtii
Cre07.g350400 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 5417983-5419982 Chlamydomonas reinhardtii
Cre07.g350400 5.0kb upstream 5.0kb upstream 6681 true chromosome_7: 5419983-5426663 Chlamydomonas reinhardtii
Cre07.g350400 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 5421664-5426663 Chlamydomonas reinhardtii
Cre07.g350400 5.0kb downstream 5.0kb downstream 6681 true chromosome_7: 5414983-5421663 Chlamydomonas reinhardtii
Cre07.g350400 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 5414983-5419982 Chlamydomonas reinhardtii
Cre07.g350400 10.0kb upstream 10.0kb upstream 11681 true chromosome_7: 5419983-5431663 Chlamydomonas reinhardtii
Cre07.g350400 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 5421664-5431663 Chlamydomonas reinhardtii
Cre07.g350400 10.0kb downstream 10.0kb downstream 11681 true chromosome_7: 5409983-5421663 Chlamydomonas reinhardtii
Cre07.g350400 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 5409983-5419982 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111053 5260 Chlorophyte View MSA
123429014 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.142     High  
cufflinks 10.48        
cufflinks 11.624       High
cufflinks 8.802        
cufflinks 8.126        
cufflinks 8.812        
cufflinks 7.589        
cufflinks 9.601        
cufflinks 11.383     High High
cufflinks 9.41     High  
cufflinks 6.085       Low
cufflinks 7.902        
cufflinks 11.01     High High
cufflinks 9.342        
cufflinks 6.507       Low
cufflinks 8.443        
cufflinks 9.994        
cufflinks 9.198        
cufflinks 5.055       Low
cufflinks 4.653       Low
cufflinks 6.665       Low
cufflinks 9.229        
cufflinks 8.109        
cufflinks 9.153        
cufflinks 9.435        
cufflinks 9.10425 1.15765 17.0508   Low
cufflinks 12.2017 1.18346 23.2199    
cufflinks 5.21393 0.0 12.1701   Low
cufflinks 8.11449 0.91528 15.3137   Low
cufflinks 8.17729 0.525405 15.8292    

0 Strain