Gene : HEL40 C. reinhardtii v5.6
Primary Identifier:  ? Cre07.g351600 Defline:  (1 of 1) KOG0326//KOG0330//KOG0340//KOG0349 - ATP-dependent RNA helicase // ATP-dependent RNA helicase // ATP-dependent RNA helicase // Putative DEAD-box RNA helicase DDX1
Genomic Order:  930 Name:  ? Cre07.g351600
Secondary Identifier:  ? PAC:30774390
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre07.g351600 0.5kb upstream 0.5kb upstream 4902 true chromosome_7: 5568683-5573584 Chlamydomonas reinhardtii
Cre07.g351600 0.5kb upstream 0.5kb upstream 500 false chromosome_7: 5568683-5569182 Chlamydomonas reinhardtii
Cre07.g351600 0.5kb downstream 0.5kb downstream 4902 true chromosome_7: 5569183-5574084 Chlamydomonas reinhardtii
Cre07.g351600 0.5kb downstream 0.5kb downstream 500 false chromosome_7: 5573585-5574084 Chlamydomonas reinhardtii
Cre07.g351600 1.0kb upstream 1.0kb upstream 5402 true chromosome_7: 5568183-5573584 Chlamydomonas reinhardtii
Cre07.g351600 1.0kb upstream 1.0kb upstream 1000 false chromosome_7: 5568183-5569182 Chlamydomonas reinhardtii
Cre07.g351600 1.0kb downstream 1.0kb downstream 5402 true chromosome_7: 5569183-5574584 Chlamydomonas reinhardtii
Cre07.g351600 1.0kb downstream 1.0kb downstream 1000 false chromosome_7: 5573585-5574584 Chlamydomonas reinhardtii
Cre07.g351600 2.0kb upstream 2.0kb upstream 6402 true chromosome_7: 5567183-5573584 Chlamydomonas reinhardtii
Cre07.g351600 2.0kb upstream 2.0kb upstream 2000 false chromosome_7: 5567183-5569182 Chlamydomonas reinhardtii
Cre07.g351600 2.0kb downstream 2.0kb downstream 6402 true chromosome_7: 5569183-5575584 Chlamydomonas reinhardtii
Cre07.g351600 2.0kb downstream 2.0kb downstream 2000 false chromosome_7: 5573585-5575584 Chlamydomonas reinhardtii
Cre07.g351600 5.0kb upstream 5.0kb upstream 9402 true chromosome_7: 5564183-5573584 Chlamydomonas reinhardtii
Cre07.g351600 5.0kb upstream 5.0kb upstream 5000 false chromosome_7: 5564183-5569182 Chlamydomonas reinhardtii
Cre07.g351600 5.0kb downstream 5.0kb downstream 9402 true chromosome_7: 5569183-5578584 Chlamydomonas reinhardtii
Cre07.g351600 5.0kb downstream 5.0kb downstream 5000 false chromosome_7: 5573585-5578584 Chlamydomonas reinhardtii
Cre07.g351600 10.0kb upstream 10.0kb upstream 14402 true chromosome_7: 5559183-5573584 Chlamydomonas reinhardtii
Cre07.g351600 10.0kb upstream 10.0kb upstream 10000 false chromosome_7: 5559183-5569182 Chlamydomonas reinhardtii
Cre07.g351600 10.0kb downstream 10.0kb downstream 14402 true chromosome_7: 5569183-5583584 Chlamydomonas reinhardtii
Cre07.g351600 10.0kb downstream 10.0kb downstream 10000 false chromosome_7: 5573585-5583584 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076222 5260 Chlorophyte Singleton cluster - no MSA
123426302 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.956        
cufflinks 0.633        
cufflinks 0.304        
cufflinks 0.581        
cufflinks 0.583        
cufflinks 0.564        
cufflinks 0.289        
cufflinks 0.701        
cufflinks 1.089        
cufflinks 0.282        
cufflinks 0.283        
cufflinks 0.788        
cufflinks 0.268        
cufflinks 0.527        
cufflinks 0.684        
cufflinks 1.338       High
cufflinks 1.355       High
cufflinks 0.472        
cufflinks 0.134       Low
cufflinks 0.241       Low
cufflinks 0.702        
cufflinks 1.391       High
cufflinks 0.115     Low Low
cufflinks 0.699        
cufflinks 1.833       High
cufflinks 1.67902 0.049614 3.30842    
cufflinks 5.35969 0.714984 10.0044    
cufflinks 1.8058 0.0 4.38053    
cufflinks 2.12989 0.128914 4.13088   High
cufflinks 1.13208 0.0 2.43519   Low

0 Strain