Gene : RPPK1 C. reinhardtii v5.6
Primary Identifier:  ? Cre08.g378850 Defline:  (1 of 1) K00948 - ribose-phosphate pyrophosphokinase (PRPS, prsA)
Genomic Order:  564 Name:  ? Cre08.g378850
Secondary Identifier:  ? PAC:30773952
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY0-662 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g378850 0.5kb upstream 0.5kb upstream 6440 true chromosome_8: 3971164-3977603 Chlamydomonas reinhardtii
Cre08.g378850 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 3977104-3977603 Chlamydomonas reinhardtii
Cre08.g378850 0.5kb downstream 0.5kb downstream 6440 true chromosome_8: 3970664-3977103 Chlamydomonas reinhardtii
Cre08.g378850 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 3970664-3971163 Chlamydomonas reinhardtii
Cre08.g378850 1.0kb upstream 1.0kb upstream 6940 true chromosome_8: 3971164-3978103 Chlamydomonas reinhardtii
Cre08.g378850 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 3977104-3978103 Chlamydomonas reinhardtii
Cre08.g378850 1.0kb downstream 1.0kb downstream 6940 true chromosome_8: 3970164-3977103 Chlamydomonas reinhardtii
Cre08.g378850 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 3970164-3971163 Chlamydomonas reinhardtii
Cre08.g378850 2.0kb upstream 2.0kb upstream 7940 true chromosome_8: 3971164-3979103 Chlamydomonas reinhardtii
Cre08.g378850 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 3977104-3979103 Chlamydomonas reinhardtii
Cre08.g378850 2.0kb downstream 2.0kb downstream 7940 true chromosome_8: 3969164-3977103 Chlamydomonas reinhardtii
Cre08.g378850 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 3969164-3971163 Chlamydomonas reinhardtii
Cre08.g378850 5.0kb upstream 5.0kb upstream 10940 true chromosome_8: 3971164-3982103 Chlamydomonas reinhardtii
Cre08.g378850 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 3977104-3982103 Chlamydomonas reinhardtii
Cre08.g378850 5.0kb downstream 5.0kb downstream 10940 true chromosome_8: 3966164-3977103 Chlamydomonas reinhardtii
Cre08.g378850 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 3966164-3971163 Chlamydomonas reinhardtii
Cre08.g378850 10.0kb upstream 10.0kb upstream 15940 true chromosome_8: 3971164-3987103 Chlamydomonas reinhardtii
Cre08.g378850 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 3977104-3987103 Chlamydomonas reinhardtii
Cre08.g378850 10.0kb downstream 10.0kb downstream 15940 true chromosome_8: 3961164-3977103 Chlamydomonas reinhardtii
Cre08.g378850 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 3961164-3971163 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110672 5260 Chlorophyte View MSA
123427852 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.263        
cufflinks 9.809       High
cufflinks 6.72        
cufflinks 7.929        
cufflinks 9.394        
cufflinks 7.824        
cufflinks 6.937        
cufflinks 8.503        
cufflinks 6.633        
cufflinks 2.307       Low
cufflinks 8.716        
cufflinks 7.876        
cufflinks 3.507       Low
cufflinks 8.329        
cufflinks 6.285        
cufflinks 9.308        
cufflinks 3.716       Low
cufflinks 6.66        
cufflinks 1.466       Low
cufflinks 5.685        
cufflinks 6.783        
cufflinks 4.325        
cufflinks 6.415        
cufflinks 9.294        
cufflinks 3.17       Low
cufflinks 53.4556 0.0 108.601 High High
cufflinks 48.877 10.7689 86.9851 High  
cufflinks 8.69841 0.0 17.5429   Low
cufflinks 23.5851 0.959061 46.2111 High Low
cufflinks 52.3082 4.55394 100.063 High High

0 Strain