Gene : Cre08.g377550 C. reinhardtii v5.6
Defline:  (1 of 2) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  537
Name:  ? Cre08.g377550 Secondary Identifier:  ? PAC:30773867
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g377550 0.5kb upstream 0.5kb upstream 3125 true chromosome_8: 3836633-3839757 Chlamydomonas reinhardtii
Cre08.g377550 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 3836633-3837132 Chlamydomonas reinhardtii
Cre08.g377550 0.5kb downstream 0.5kb downstream 3125 true chromosome_8: 3837133-3840257 Chlamydomonas reinhardtii
Cre08.g377550 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 3839758-3840257 Chlamydomonas reinhardtii
Cre08.g377550 1.0kb upstream 1.0kb upstream 3625 true chromosome_8: 3836133-3839757 Chlamydomonas reinhardtii
Cre08.g377550 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 3836133-3837132 Chlamydomonas reinhardtii
Cre08.g377550 1.0kb downstream 1.0kb downstream 3625 true chromosome_8: 3837133-3840757 Chlamydomonas reinhardtii
Cre08.g377550 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 3839758-3840757 Chlamydomonas reinhardtii
Cre08.g377550 2.0kb upstream 2.0kb upstream 4625 true chromosome_8: 3835133-3839757 Chlamydomonas reinhardtii
Cre08.g377550 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 3835133-3837132 Chlamydomonas reinhardtii
Cre08.g377550 2.0kb downstream 2.0kb downstream 4625 true chromosome_8: 3837133-3841757 Chlamydomonas reinhardtii
Cre08.g377550 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 3839758-3841757 Chlamydomonas reinhardtii
Cre08.g377550 5.0kb upstream 5.0kb upstream 7625 true chromosome_8: 3832133-3839757 Chlamydomonas reinhardtii
Cre08.g377550 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 3832133-3837132 Chlamydomonas reinhardtii
Cre08.g377550 5.0kb downstream 5.0kb downstream 7625 true chromosome_8: 3837133-3844757 Chlamydomonas reinhardtii
Cre08.g377550 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 3839758-3844757 Chlamydomonas reinhardtii
Cre08.g377550 10.0kb upstream 10.0kb upstream 12625 true chromosome_8: 3827133-3839757 Chlamydomonas reinhardtii
Cre08.g377550 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 3827133-3837132 Chlamydomonas reinhardtii
Cre08.g377550 10.0kb downstream 10.0kb downstream 12625 true chromosome_8: 3837133-3849757 Chlamydomonas reinhardtii
Cre08.g377550 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 3839758-3849757 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112131 5260 Chlorophyte View MSA
123428914 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.0     High  
cufflinks 25.89     High  
cufflinks 40.537     High  
cufflinks 40.187     High  
cufflinks 17.857     High Low
cufflinks 27.029     High  
cufflinks 84.364     High  
cufflinks 108.764     High  
cufflinks 11.07     High Low
cufflinks 8.283     High Low
cufflinks 39.208     High  
cufflinks 111.628     High  
cufflinks 74.471     High  
cufflinks 40.798     High  
cufflinks 70.534     High  
cufflinks 18.896     High Low
cufflinks 166.426     High High
cufflinks 25.29     High  
cufflinks 90.803     High  
cufflinks 499.012     High High
cufflinks 56.362     High  
cufflinks 146.457     High  
cufflinks 151.256     High High
cufflinks 162.813     High High
cufflinks 163.154     High High
cufflinks 5.06723 0.857373 9.27709 High High
cufflinks 20.9911 5.42978 36.5525    
cufflinks 72.0134 0.0 150.314 High  
cufflinks 67.1788 0.0 137.209 High High
cufflinks 8.01974 1.60184 14.4376   Low

0 Strain