Gene : Cre08.g377400 C. reinhardtii v5.6
Defline:  (1 of 39) PTHR12298 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED Genomic Order:  534
Name:  ? Cre08.g377400 Secondary Identifier:  ? PAC:30773764
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre08.g377400 0.5kb upstream 0.5kb upstream 5406 true chromosome_8: 3807317-3812722 Chlamydomonas reinhardtii
Cre08.g377400 0.5kb upstream 0.5kb upstream 500 false chromosome_8: 3812223-3812722 Chlamydomonas reinhardtii
Cre08.g377400 0.5kb downstream 0.5kb downstream 5406 true chromosome_8: 3806817-3812222 Chlamydomonas reinhardtii
Cre08.g377400 0.5kb downstream 0.5kb downstream 500 false chromosome_8: 3806817-3807316 Chlamydomonas reinhardtii
Cre08.g377400 1.0kb upstream 1.0kb upstream 5906 true chromosome_8: 3807317-3813222 Chlamydomonas reinhardtii
Cre08.g377400 1.0kb upstream 1.0kb upstream 1000 false chromosome_8: 3812223-3813222 Chlamydomonas reinhardtii
Cre08.g377400 1.0kb downstream 1.0kb downstream 5906 true chromosome_8: 3806317-3812222 Chlamydomonas reinhardtii
Cre08.g377400 1.0kb downstream 1.0kb downstream 1000 false chromosome_8: 3806317-3807316 Chlamydomonas reinhardtii
Cre08.g377400 2.0kb upstream 2.0kb upstream 6906 true chromosome_8: 3807317-3814222 Chlamydomonas reinhardtii
Cre08.g377400 2.0kb upstream 2.0kb upstream 2000 false chromosome_8: 3812223-3814222 Chlamydomonas reinhardtii
Cre08.g377400 2.0kb downstream 2.0kb downstream 6906 true chromosome_8: 3805317-3812222 Chlamydomonas reinhardtii
Cre08.g377400 2.0kb downstream 2.0kb downstream 2000 false chromosome_8: 3805317-3807316 Chlamydomonas reinhardtii
Cre08.g377400 5.0kb upstream 5.0kb upstream 9906 true chromosome_8: 3807317-3817222 Chlamydomonas reinhardtii
Cre08.g377400 5.0kb upstream 5.0kb upstream 5000 false chromosome_8: 3812223-3817222 Chlamydomonas reinhardtii
Cre08.g377400 5.0kb downstream 5.0kb downstream 9906 true chromosome_8: 3802317-3812222 Chlamydomonas reinhardtii
Cre08.g377400 5.0kb downstream 5.0kb downstream 5000 false chromosome_8: 3802317-3807316 Chlamydomonas reinhardtii
Cre08.g377400 10.0kb upstream 10.0kb upstream 14906 true chromosome_8: 3807317-3822222 Chlamydomonas reinhardtii
Cre08.g377400 10.0kb upstream 10.0kb upstream 10000 false chromosome_8: 3812223-3822222 Chlamydomonas reinhardtii
Cre08.g377400 10.0kb downstream 10.0kb downstream 14906 true chromosome_8: 3797317-3812222 Chlamydomonas reinhardtii
Cre08.g377400 10.0kb downstream 10.0kb downstream 10000 false chromosome_8: 3797317-3807316 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081716 5260 Chlorophyte View MSA
123399430 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.744       Low
cufflinks 1.952        
cufflinks 1.348        
cufflinks 1.619        
cufflinks 1.56        
cufflinks 1.419        
cufflinks 1.549        
cufflinks 2.061       High
cufflinks 0.994        
cufflinks 0.554       Low
cufflinks 1.256        
cufflinks 1.822        
cufflinks 0.825       Low
cufflinks 1.559        
cufflinks 1.516        
cufflinks 1.516        
cufflinks 1.478        
cufflinks 1.68        
cufflinks 0.494       Low
cufflinks 2.134       High
cufflinks 1.528        
cufflinks 1.392        
cufflinks 1.532        
cufflinks 2.251       High
cufflinks 1.606        
cufflinks 6.52166 0.773505 12.2698    
cufflinks 2.67416 0.560448 4.78787    
cufflinks 2.20789 0.0 4.68644    
cufflinks 2.14177 0.33259 3.95095    
cufflinks 2.27405 0.312029 4.23608    

0 Strain